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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22002.1
DDBJ      :             probable membrane permease of unknown function
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:402 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->399 1pw4A_ f.38.1.1 * 4e-42 21.1 %
:HMM:PFM   14->238 PF07690 * MFS_1 4.6e-14 19.8 222/353  
:HMM:PFM   223->393 PF07690 * MFS_1 1.9e-13 22.6 168/353  
:BLT:SWISS 254->390 GLCP_BACSU 6e-07 30.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22002.1 GT:GENE AAZ22002.1 GT:PRODUCT probable membrane permease of unknown function GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1145866..1147074) GB:FROM 1145866 GB:TO 1147074 GB:DIRECTION - GB:PRODUCT probable membrane permease of unknown function GB:PROTEIN_ID AAZ22002.1 GB:DB_XREF GI:71062999 LENGTH 402 SQ:AASEQ MFKSLNFKVILFGFIFTFFSSFGQSFFLGLFNSSIRDALSITHGQFGSIYASATLLSSFILVWVGKKIDDFNILKFASYVIALLAISCFLFSKISSVAFLFLSIFLMRLSGQGLMSHTATTTISRFFEKTRGRALSTTWLGLSLAEFILPLLIIFLLTFIDWRNIWIAISISVIIILPIVIVTLVKNVKLDSRETSIATNIKTKDIKQWTRGEVLKDYRFYIICLSMLAMPWIATGTFVYQSFIVSSKGWGPYVIAQSFMVYSILSVITLFLTGFLIDKFSSRKLIIYMNIPLLVATFVLYYFNSPISSFVFLGLIGISNGLANVLGSATWAEIYGVRYIGSIKALTTALMVFSTAFGTALFGILIDNSLSIEQIALVSGSYILIAILLLFLVKNKLNPDYL GT:EXON 1|1-402:0| BL:SWS:NREP 1 BL:SWS:REP 254->390|GLCP_BACSU|6e-07|30.2|129/401| TM:NTM 11 TM:REGION 9->31| TM:REGION 47->65| TM:REGION 82->104| TM:REGION 136->158| TM:REGION 167->189| TM:REGION 222->244| TM:REGION 254->276| TM:REGION 285->307| TM:REGION 309->331| TM:REGION 345->367| TM:REGION 373->394| SEG 11->34|lfgfiftffssfgqsfflglfnss| SEG 147->160|filplliiflltfi| SEG 165->185|iwiaisisviiilpivivtlv| HM:PFM:NREP 2 HM:PFM:REP 14->238|PF07690|4.6e-14|19.8|222/353|MFS_1| HM:PFM:REP 223->393|PF07690|1.9e-13|22.6|168/353|MFS_1| HM:SCP:REP 1->399|1pw4A_|4e-42|21.1|393/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 19 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------1------1------1----1-11-1---11----------------------------------------------1--------------------------------------------------1-----------------------------1-----------------------------------------------------------1----1------------------------1--------------------------------------------1------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 187-208, 399-402| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccc //