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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22029.1
DDBJ      :             Cytochrome b561 family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  123/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.21.1
:180 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  9->180 1kqfC_ f.21.1.1 * 8.2e-26 26.7 %
:HMM:PFM   13->179 PF00033 * Cytochrom_B_N 2.1e-29 28.6 161/188  
:BLT:SWISS 6->180 C56I_ECOLI 5e-10 23.4 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22029.1 GT:GENE AAZ22029.1 GT:PRODUCT Cytochrome b561 family GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1169944..1170486 GB:FROM 1169944 GB:TO 1170486 GB:DIRECTION + GB:PRODUCT Cytochrome b561 family GB:PROTEIN_ID AAZ22029.1 GB:DB_XREF GI:71063026 LENGTH 180 SQ:AASEQ MFNLNMSIFNNISKYGLLAKLIHWLTAAGLLIQIPLGFYLVDLDFDQFRVDIENYHILFGLILFYTTLIRLTFKLLSPTPNFNDNAFPGQKVLAKLNHFFLYLALLTITISGIFKKLFNGESLVIFFKKVNLTYNFELSEQFYSIHVLANYVLIGLIALHILAVLFHKFLLRENILKRIL GT:EXON 1|1-180:0| BL:SWS:NREP 1 BL:SWS:REP 6->180|C56I_ECOLI|5e-10|23.4|175/188| TM:NTM 4 TM:REGION 19->41| TM:REGION 54->76| TM:REGION 99->121| TM:REGION 146->168| HM:PFM:NREP 1 HM:PFM:REP 13->179|PF00033|2.1e-29|28.6|161/188|Cytochrom_B_N| HM:SCP:REP 9->180|1kqfC_|8.2e-26|26.7|165/0|f.21.1.1|1/1|Transmembrane di-heme cytochromes| OP:NHOMO 150 OP:NHOMOORG 124 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-211---12-1-----------------------------------------2-------1-------------11-111-11--------------------1-111----------1------1111--211111--113-----1-----1--------1----1-1---------------------------------------------------------------------------121122111-111-11-1111---111--------------1----1----1-1-1-------11-11--11-----1---22--1----------------1---------221222122222---------111-11------------------11111111111------2221----1211-11111111----1-----21---------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 6-7| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //