[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22036.1
DDBJ      :             Thioredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:122 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   19->121 1faaA PDBj 7e-07 32.7 %
:RPS:PDB   25->115 2diyA PDBj 8e-13 14.8 %
:RPS:SCOP  16->122 1qgvA  c.47.1.8 * 4e-11 11.2 %
:HMM:SCOP  21->123 1ti3A_ c.47.1.1 * 7.8e-21 23.5 %
:RPS:PFM   38->120 PF00085 * Thioredoxin 2e-06 22.9 %
:HMM:PFM   21->120 PF00085 * Thioredoxin 4.3e-14 18.8 96/104  
:HMM:PFM   1->23 PF09403 * FadA 0.001 47.8 23/126  
:BLT:SWISS 27->120 TRXH1_TOBAC 3e-07 25.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22036.1 GT:GENE AAZ22036.1 GT:PRODUCT Thioredoxin GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1175833..1176201) GB:FROM 1175833 GB:TO 1176201 GB:DIRECTION - GB:PRODUCT Thioredoxin GB:PROTEIN_ID AAZ22036.1 GB:DB_XREF GI:71063033 LENGTH 122 SQ:AASEQ MKKILILIFILLSFNSFAVEKNTTFNNEIFQKAQLDGKIVVINSWNETCTTCKVQIKILNQAEKDFEDILFLSFEQEKDKTIAKQLGIDYWTTIVIYQNNKEVYRSIGQMNKDKIYSAIKSL GT:EXON 1|1-122:0| BL:SWS:NREP 1 BL:SWS:REP 27->120|TRXH1_TOBAC|3e-07|25.5|94/126| SEG 4->12|ililifill| BL:PDB:NREP 1 BL:PDB:REP 19->121|1faaA|7e-07|32.7|101/121| RP:PDB:NREP 1 RP:PDB:REP 25->115|2diyA|8e-13|14.8|88/130| RP:PFM:NREP 1 RP:PFM:REP 38->120|PF00085|2e-06|22.9|83/103|Thioredoxin| HM:PFM:NREP 2 HM:PFM:REP 21->120|PF00085|4.3e-14|18.8|96/104|Thioredoxin| HM:PFM:REP 1->23|PF09403|0.001|47.8|23/126|FadA| GO:PFM:NREP 1 GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766| RP:SCP:NREP 1 RP:SCP:REP 16->122|1qgvA|4e-11|11.2|107/130|c.47.1.8| HM:SCP:REP 21->123|1ti3A_|7.8e-21|23.5|102/0|c.47.1.1|1/1|Thioredoxin-like| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 109 STR:RPRED 89.3 SQ:SECSTR #############ccccccEEccGHHHHHHHHHHTTccEEEEEEEcccccHHHHHHHHHHHHHHHcTTEEEEEEETTTcHHHHHHHTcccccEEEEEccccEEEEEEcccHHHHHHHHHHHH PSIPRED cHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHcccccccEEEEEEccEEEEEEEccccHHHHHHHHHcc //