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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22059.1
DDBJ      :             Putative NADPH-quinone reductase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  170/915 : Eukaryota  50/199 : Viruses  0/175   --->[See Alignment]
c.23.5
:189 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->176 1zx1B PDBj 1e-17 29.4 %
:RPS:PDB   2->189 1d4aA PDBj 1e-32 25.1 %
:RPS:SCOP  2->189 1d4aA  c.23.5.3 * 5e-33 25.1 %
:HMM:SCOP  1->189 1dxqA_ c.23.5.3 * 4.2e-48 29.9 %
:RPS:PFM   3->159 PF02525 * Flavodoxin_2 3e-18 34.9 %
:HMM:PFM   2->183 PF02525 * Flavodoxin_2 1.2e-38 33.9 174/196  
:BLT:SWISS 2->179 NQO2_RAT 6e-19 34.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22059.1 GT:GENE AAZ22059.1 GT:PRODUCT Putative NADPH-quinone reductase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1196458..1197027) GB:FROM 1196458 GB:TO 1197027 GB:DIRECTION - GB:PRODUCT Putative NADPH-quinone reductase GB:NOTE similar to YabF family Clostridium acetobutylicum pir||B96902 probable NADP GB:PROTEIN_ID AAZ22059.1 GB:DB_XREF GI:71063056 LENGTH 189 SQ:AASEQ MKKIFLLYGHYNEKSFNAAIRDTFIKTAEKNGNTVDCVDLYKDKFNPVFAGEQAGEDVLDHRRRIEKCDIIVLIAPIWNFRMPAIVEGWIDKVLSPPWAYTFKKLVGNYGYPMGNLKDKKAIIFCTYGSPRLAVTTFFLNLPIRRLKRGVFHMCGIYNIVYRRYFAVPFVTDEKRKEFLEDVKKTANNI GT:EXON 1|1-189:0| BL:SWS:NREP 1 BL:SWS:REP 2->179|NQO2_RAT|6e-19|34.7|173/231| BL:PDB:NREP 1 BL:PDB:REP 2->176|1zx1B|1e-17|29.4|170/229| RP:PDB:NREP 1 RP:PDB:REP 2->189|1d4aA|1e-32|25.1|183/273| RP:PFM:NREP 1 RP:PFM:REP 3->159|PF02525|3e-18|34.9|152/193|Flavodoxin_2| HM:PFM:NREP 1 HM:PFM:REP 2->183|PF02525|1.2e-38|33.9|174/196|Flavodoxin_2| GO:PFM:NREP 3 GO:PFM GO:0009055|"GO:electron carrier activity"|PF02525|IPR003680| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02525|IPR003680| GO:PFM GO:0050662|"GO:coenzyme binding"|PF02525|IPR003680| RP:SCP:NREP 1 RP:SCP:REP 2->189|1d4aA|5e-33|25.1|183/273|c.23.5.3| HM:SCP:REP 1->189|1dxqA_|4.2e-48|29.9|184/0|c.23.5.3|1/1|Flavoproteins| OP:NHOMO 330 OP:NHOMOORG 225 OP:PATTERN ----------------------------------------------11--111--------------- 1---2------------------------------------11-----------------11------------------1-----11-------------1---21--------------------------------------------------------------------------------------122222122-222222-1113-222---1---------22------------------------11---1---------11-2----------111------------------------211---111--1-1-111-1-1-1-----------------------------------1--------------------1--1-------------11-1221-131-3--122122112-----12------------------1----------------------------------1----1----1111211-111111--1111--112-111--11--1-------1---------------------1-11----1--------------1----11---1-----------------------------------------------------------------------------------------------------------1-111-------------------1-------------------------------------1-111121-1111-111111111----1-3223221-112111112-------------------1----21----------------11---------------------------------------------------1- -------------------------------------------------------------------1----------------------------------------1--8B2212-12112142131662-2321211311311211-2123-1211----2--------------------1---1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 189 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEccccTTcHHHHHHHHHHHHHHHTTcEEEEEETTTTTccccccGGGccHHHHHHHHHHHHccEEEEEEEccTTcccHHHHHHHHHHcccTTTccTTccTTcccGGGcTTTTcEEEEEEEccccTGGGcTTcTTccHHHHHTTTTGGGTcEEcccEEETTGGGccHHHHHHHHHHHHHHHTTG PSIPRED ccEEEEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEcHHHccccccccccccHHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHHccEEEEccccccccccccccccccEEEEEEEccccHHHccccccccHHHHHHHHHHHHHccEEccEEEEcccccccHHHHHHHHHHHHHHHHcc //