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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22073.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  21/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:550 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   376->487 2efbA PDBj 5e-04 19.8 %
:BLT:SWISS 207->419 RECX_CLOTE 6e-05 30.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22073.1 GT:GENE AAZ22073.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1204894..1206546) GB:FROM 1204894 GB:TO 1206546 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE similar to Pseudomonas putida KT2440 gb|AAN68299.1 GB:PROTEIN_ID AAZ22073.1 GB:DB_XREF GI:71063070 LENGTH 550 SQ:AASEQ MNISLRDPNVVMKLSRLGSFHQSKLSFLRSFLKEFKDWNYKRDLFELNEHGYGTAVYSFKKKNRVYSLICFANELDDNERSDRVIATKWDAAFTLFDGVPKKQDIERLKNEVPKQEFGRLSYKELTLSRANKSVRVFNHVVECLSEGKQPDNDLLTSVGYLYRTTAVYGSGKFGLADRFRIKDREEIYGPFRLEMMLVYLVRQFTFDQVNHVAKSKNPKKAVNLDINICKGLGIGNSTGLGMAPFIVNHPTLLNNWISAREISLKKIREIKTISEKDKNLFLECLKKSIKNITSWNTESEYQINKIKSLLKDLNEFIVYLDNEFNFEQDYAFNELYLYLEKKYCEECIEYVVSMMMEPYDDITSPLIKEMSSEEEKYFNIPTERTVEDLKLILEKKYPDILTIDFTKDENNLNFWFISKNKEEPRLANRFDEVGAELEQPLAIARDIKKLYESLTVAKNSWTIAKFLSTNNELRHVVRRAFIVEKFPYSEIQDNTIGQEIMPIDMLRLKLSFFGALKFDPRSDKWLRICMFQGAPLPEQLKNYDEHWVYN GT:EXON 1|1-550:0| BL:SWS:NREP 1 BL:SWS:REP 207->419|RECX_CLOTE|6e-05|30.6|186/216| RP:PDB:NREP 1 RP:PDB:REP 376->487|2efbA|5e-04|19.8|106/595| OP:NHOMO 22 OP:NHOMOORG 22 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----11-----111---------------------------------------------1---------------------------------1-----------------------------------------------------------------------------------------------------------1---1------------------1-----------------------------------------------------------------------------------------------------------------------------------------11-------1---1-1---------------1--------1-1--------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 106 STR:RPRED 19.3 SQ:SECSTR #######################################################################################################################################################################################################################################################################################################################################################################################HHTTccccccHHHHHHHHTcHHHHHHHHHHHccGGGccHHH#HHHHccccTTccccHHHHHH#####HHHHHHHHTTcccHHHTTccHHHHHHHHccccEEEccccccccTT############################################################### DISOP:02AL 1-6| PSIPRED cccccccHHHHccHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEcccccEEEEEEEEcccEEEEEEEEEEcccccccccccHHHHHHHEEEEEEccccHHHHHHHHHHccHHHHccccHHEEEEEEccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccEEcccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccHHHcccccHHHHccEEEEEEcccccccccccccccHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccHHHHccccccccc //