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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22074.1
DDBJ      :             dipeptidase
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  285/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
c.1.9
:323 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->321 2i5gA PDBj 2e-41 35.8 %
:RPS:PDB   57->320 3b40A PDBj 1e-16 19.7 %
:RPS:SCOP  27->323 1itqA  c.1.9.7 * 4e-63 24.5 %
:HMM:SCOP  1->322 1ituA_ c.1.9.7 * 6.7e-84 33.6 %
:RPS:PFM   58->314 PF01244 * Peptidase_M19 2e-40 37.4 %
:HMM:PFM   19->319 PF01244 * Peptidase_M19 1.5e-74 31.5 270/320  
:BLT:SWISS 69->323 DPEP1_HUMAN 4e-21 25.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22074.1 GT:GENE AAZ22074.1 GT:PRODUCT dipeptidase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1206543..1207514) GB:FROM 1206543 GB:TO 1207514 GB:DIRECTION - GB:PRODUCT dipeptidase GB:PROTEIN_ID AAZ22074.1 GB:DB_XREF GI:71063071 LENGTH 323 SQ:AASEQ MNFKIDNLQYCNWSREIFQINKQAGLDAIHVTIVYHEDFDELKTVLKNWENHFSENSDLIFHGKSFKDIEKAKSENKTAVFFGFQNCSPIEDDIGLVEKVYDLGCRFMQLTYNNQSLLATGCYEAIDSGVTNFGKEVIKEMNRLGLVIDMSHSAEKSTIDAIEISEKPIAITHANPSFWHPAKRNKSNELLKILSKHKGMLGLSLYPHHLKDGTDCSLESFCEMTAKTAEIMGVEKIGIGSDLCLNQPDTIVEWMRNGTWTKSKNYGEGSKNKPGFPKQPDWFLDARGFENLEIGLKKVGFSESEVNGILGNNWYNFYKEMNQ GT:EXON 1|1-323:0| BL:SWS:NREP 1 BL:SWS:REP 69->323|DPEP1_HUMAN|4e-21|25.3|225/411| BL:PDB:NREP 1 BL:PDB:REP 5->321|2i5gA|2e-41|35.8|302/317| RP:PDB:NREP 1 RP:PDB:REP 57->320|3b40A|1e-16|19.7|264/400| RP:PFM:NREP 1 RP:PFM:REP 58->314|PF01244|2e-40|37.4|227/312|Peptidase_M19| HM:PFM:NREP 1 HM:PFM:REP 19->319|PF01244|1.5e-74|31.5|270/320|Peptidase_M19| GO:PFM:NREP 4 GO:PFM GO:0006508|"GO:proteolysis"|PF01244|IPR008257| GO:PFM GO:0008235|"GO:metalloexopeptidase activity"|PF01244|IPR008257| GO:PFM GO:0008239|"GO:dipeptidyl-peptidase activity"|PF01244|IPR008257| GO:PFM GO:0016805|"GO:dipeptidase activity"|PF01244|IPR008257| RP:SCP:NREP 1 RP:SCP:REP 27->323|1itqA|4e-63|24.5|257/369|c.1.9.7| HM:SCP:REP 1->322|1ituA_|6.7e-84|33.6|289/0|c.1.9.7|1/1|Metallo-dependent hydrolases| OP:NHOMO 640 OP:NHOMOORG 428 OP:PATTERN 111---1111111111-21111--------------------------------11211111------ -33-1-------------------11-----1----12-1----1--1-1------------2-1-1112----------11---------2-211-------11--111--------------------------11111----21--1--------------------1------------1--11---11-1111111111111111111--11111112--11111142------------------------------------------------------------------------------------------13--1111111111113111111-11--1--1-111111111-1111--15--2112------------------11--1-----2--------1121-2222111111241111111311111231111111111111-1------------------------------12223--221-2111111111111211111-1111-1------1------1---1-----------------------1-----------------1----1--111-1------------------------------1--212111111111-111111-1112--1----------------1-------------------------------------------------------------------------------2-1--2-------11---------------111-111-11-12221122122231-322----------1--------1-1--1111111111-------1----------------1---------------------------1---1------ --------------1----1112212-1111113231212222111--232231--2----1-11-11----1-------1-----11-121-1211112---111-2-2A23213212221225325-7G3-335-2223223-1332131-221121122132624559--22-----------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 318 STR:RPRED 98.5 SQ:SECSTR ####EEEEEcccccHHHHH#HHHTTccEEEEEccccccHHHHHHHHHHHHHHHHHTTTTEEEcccHHHHHHHHHTTcEEEEEEEEccGGGTTcTHHHHHHHHTTccEEEccccccccccccccccGGccccHHHHHHHHHHHHHTcEEEcTTccHHHHHHHHHHccccEEEEEEccTTTcccTTcccHHHHHHHHHTTcEEEEEccHHHHcccHHHHHHHHHHHHTTcccccccTTTcccccHHTcccccHHHHHHHHHHHHHHHcGGGEEEEcccTTTccTcccGGGHHHHHHHHHHHTccHHHHHHHTTHHHHHHHHHHHH PSIPRED cccEEcccEEcccccccHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHccccEEEEcccccccccccccccccccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHccccEEEEcccHHHcccccccccHHHHHHHHHcccEEEEEEEHHHccccccccHHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcc //