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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22111.1
DDBJ      :             GXGXG motif-containing protein
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  89/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.80.4
:284 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   95->211 1ofeA PDBj 3e-07 30.2 %
:RPS:SCOP  100->212 1ea0A1  b.80.4.1 * 2e-20 25.0 %
:HMM:SCOP  54->247 1ea0A1 b.80.4.1 * 9.9e-38 26.4 %
:RPS:PFM   111->211 PF01493 * GXGXG 3e-09 36.6 %
:HMM:PFM   65->232 PF01493 * GXGXG 2.4e-30 28.4 162/202  
:BLT:SWISS 56->273 GLXC_RHIME 6e-31 36.5 %
:REPEAT 2|101->154|158->211
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22111.1 GT:GENE AAZ22111.1 GT:PRODUCT GXGXG motif-containing protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1243042..1243896 GB:FROM 1243042 GB:TO 1243896 GB:DIRECTION + GB:PRODUCT GXGXG motif-containing protein GB:PROTEIN_ID AAZ22111.1 GB:DB_XREF GI:71063108 LENGTH 284 SQ:AASEQ MANLKNTEKKTKAQSMGMHSEVLTGRTQQKFFNPDEGENLYYFGTYDVDFNKRTELDVKDMTAPEANKEIDNLMSQGFGTIVIKNPQGKHSLGVGILNKLNLIFEGSLGYFGMGSCDGPTVRINGRVGWSCAENLMAGKVVIEKNAGSCFGAAIRGGDLICKGSVGARTGIDMKGGTIIVGGDAGAFTGFMMQRGRIIILGDVGINLGDSMYDGTIFIGGKIGSFGSDAVPADLTASDQDWLKRKLKVAEIGEKFDVSKMTKIVAGKKLWNYDNLEPHEKKGAI GT:EXON 1|1-284:0| BL:SWS:NREP 1 BL:SWS:REP 56->273|GLXC_RHIME|6e-31|36.5|211/228| NREPEAT 1 REPEAT 2|101->154|158->211| SEG 214->227|gtifiggkigsfgs| BL:PDB:NREP 1 BL:PDB:REP 95->211|1ofeA|3e-07|30.2|116/1485| RP:PFM:NREP 1 RP:PFM:REP 111->211|PF01493|3e-09|36.6|101/195|GXGXG| HM:PFM:NREP 1 HM:PFM:REP 65->232|PF01493|2.4e-30|28.4|162/202|GXGXG| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF01493|IPR002489| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01493|IPR002489| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01493|IPR002489| RP:SCP:NREP 1 RP:SCP:REP 100->212|1ea0A1|2e-20|25.0|112/270|b.80.4.1| HM:SCP:REP 54->247|1ea0A1|9.9e-38|26.4|193/0|b.80.4.1|1/1|Alpha subunit of glutamate synthase, C-terminal domain| OP:NHOMO 136 OP:NHOMOORG 115 OP:PATTERN ---1----------1----11--1--------112222323211--111-2122-1-----1------ ---------------------1---1------11111-11-1-----------1----------------------------1----------------------------------------------------------111--------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------1------------------------1------1------1-111112-----1----------1-11------1-------------11-11-11-1--11111111112111---1------1-1------------1--------------------------------2------------------------2-----------1------1--------11----2-2-------------1--------1--1111--1--111-------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------1-------------------------1------------11-1---111---------1-------------------------------------------------------------------------------1-111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 116 STR:RPRED 40.8 SQ:SECSTR ##############################################################################################ccccEEEEEEEEEEcTTTTTccTTEEEEEEEEEcccTTTTcEEEEEEEEccTTccccGTccEEEEEEcccccccTTTTccccEEEEcc#ccccTTTTcEEEEEEEccccccccTTTc######################################################################### DISOP:02AL 1-7, 280-284| PSIPRED cccHHHHHHHHHHHHccccHHHHHcccHHHHcccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHcccccEEEEEcccccccccccccccEEEEEEEcccHHHHccccccEEEEEEccccHHHccccccEEEEEcccccEEEEcccccEEEEEEccccEEEEEccccEEEEEcccccHHHHHHcccEEEEEcccccHHcccccccEEEEEEcccccccccEEEcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHccccccccHHHHcccc //