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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22112.1
DDBJ      :             glutamate synthase large subunit-like protein
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  652/915 : Eukaryota  126/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:474 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   122->403 2vdcA PDBj 2e-21 30.3 %
:RPS:PDB   114->332 3bw2A PDBj 3e-13 14.3 %
:RPS:PDB   384->444 2bh1A PDBj 1e-07 16.4 %
:RPS:SCOP  95->439 1ea0A2  c.1.4.1 * 5e-39 25.5 %
:HMM:SCOP  44->453 1llwA2 c.1.4.1 * 7.3e-92 38.4 %
:RPS:PFM   109->432 PF01645 * Glu_synthase 1e-35 36.1 %
:HMM:PFM   103->432 PF01645 * Glu_synthase 8.1e-88 39.1 312/368  
:BLT:SWISS 42->467 GLXD_RHIME 3e-84 43.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22112.1 GT:GENE AAZ22112.1 GT:PRODUCT glutamate synthase large subunit-like protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1243896..1245320 GB:FROM 1243896 GB:TO 1245320 GB:DIRECTION + GB:PRODUCT glutamate synthase large subunit-like protein GB:NOTE GlxD-like protein GB:PROTEIN_ID AAZ22112.1 GB:DB_XREF GI:71063109 LENGTH 474 SQ:AASEQ MAKKKTKKNEKKLKKAKGSVGGKADVHAHEDGKRNKSLLGHNAIFTPEVIDDIHIKAQLGRYRMRGMALMKKIPTFDDLVFLPGTLTRFVIEGYREKCETKTIIGPNCENPIELDIPVYITGMSFGALSYEAKTALARGATMAGSATCSGEGGMIPDERRYSEKWYYQCIQSRYGFNPHHAQLADAIEVFIGQGQKVGMGGHLMGQKVTDQVAEMRSLPSGIDQRSPARHPDWLGPDDLALKVEELRQLTKNKVPIQLKLGASKVYDDVRMAAKCNPDSIFLDGMEGSTGAGPHIAAANTGIPGIAAIREARRAIDDVGKTGQVTLIYAGGIRDGADMAKALALGADAIAIGTGALIALNCNKDIPEANFEKEMGVKAGDCYHCHTGRCPVGVATQDPKLRARLNPDDAALRVYNYLHAMTLEAQLLARACGKTNIHSLEPEDLAALTMEASALAKVPLTGTNFTVGVDNYHKI GT:EXON 1|1-474:0| BL:SWS:NREP 1 BL:SWS:REP 42->467|GLXD_RHIME|3e-84|43.8|425/442| SEG 3->17|kkktkknekklkkak| SEG 305->315|iaairearrai| SEG 334->359|dgadmakalalgadaiaigtgalial| BL:PDB:NREP 1 BL:PDB:REP 122->403|2vdcA|2e-21|30.3|264/1472| RP:PDB:NREP 2 RP:PDB:REP 114->332|3bw2A|3e-13|14.3|203/347| RP:PDB:REP 384->444|2bh1A|1e-07|16.4|61/238| RP:PFM:NREP 1 RP:PFM:REP 109->432|PF01645|1e-35|36.1|305/342|Glu_synthase| HM:PFM:NREP 1 HM:PFM:REP 103->432|PF01645|8.1e-88|39.1|312/368|Glu_synthase| GO:PFM:NREP 2 GO:PFM GO:0006537|"GO:glutamate biosynthetic process"|PF01645|IPR002932| GO:PFM GO:0015930|"GO:glutamate synthase activity"|PF01645|IPR002932| RP:SCP:NREP 1 RP:SCP:REP 95->439|1ea0A2|5e-39|25.5|325/763|c.1.4.1| HM:SCP:REP 44->453|1llwA2|7.3e-92|38.4|385/0|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 1215 OP:NHOMOORG 825 OP:PATTERN ---1--1111111111-11111111--111112131112111112-21111111-1-----1------ 11113--111111111111-14112411111245552465132211-11111121221--112111231211111111----211111--1111-----1-2-3212212---------------2112231122211111111112121112111111111112111111111111111111111111--122222222221222222111122222211-31211111131-2222222222222222122----11---------11----1-111--------11----------------------------------11-11-------1-1-111------1--1111122111-2-121112---2111111-----142332122223211111111111-22-22-22122-2222222222323321233111113231111111121112211-----------------------------42131111112111111111111112111111111111-1222122111211222112121211-------112-2-11213221112222-121122232111111111--1-11111----------1111111111222422222232312322223233223---3223------111111-111111-111-1111111111111111111111111111111--1---11111121111111--111111111111---111111111112222-----------1---222121312222222232233343312221-111111-21112222222332222111111111111111-221222--------------------------------------1--1-111111 11----1-1---11111111111111111111111111-1-111111111111111111111111111-11-111-1-1111111111-1211111----121212-11-2---------------------------------------------------122112113113-1212V1111262141442242111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 396 STR:RPRED 83.5 SQ:SECSTR ###########################################cccccccTHHHHHHHTTccHHHHcccTTcHHHHHHHHGGGGEEEccccccccccccccEEETT####TEEccccEEEcccTTTTccHHHHHHHHHHHHHTTccEEEEcTTccHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHTHHHHHHTTcccccccccccTTHHHHHHHccccEcHHEEEEcccccHHHHHHHHHHHTTcEEEEEEccEccHHHHHHHHHTTccEEEEEcTTGTccccEEcccccccGGGTTccccHHHHHHHHHHHccccEEEEcccccTHHHHHHHHTTccEEEEcGGGTTcTTccc####HHHHHHHHH##HGGGcEEEEEccTTcGGGHHHHHHHHHGGGccccGGGEEEEEEEEcccEEEEEEEEHHHHHHHHHHEEccc######################### DISOP:02AL 1-9, 470-474| PSIPRED cccccHHHHHHHHHHHHHccccccHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccEEEccEEEEccccccccHHHHHHHHHHHHHccccEEcccccccHHHHcccccEEEEEEcccccccHHHHccccEEEEcccccccccccccccHHHccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHccccEEEEcccccccccHHHHHHHcccccHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcccccEEEEEccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHcccHHHHHHHccccccccccccccccccc //