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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22134.1
DDBJ      :             putative lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:245 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   109->147 PF10026 * DUF2268 0.00014 28.9 38/195  
:BLT:SWISS 17->231 SID1_CAEEL 1e-04 24.3 %
:PROS 134->143|PS00142|ZINC_PROTEASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22134.1 GT:GENE AAZ22134.1 GT:PRODUCT putative lipoprotein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1265702..1266439 GB:FROM 1265702 GB:TO 1266439 GB:DIRECTION + GB:PRODUCT putative lipoprotein GB:PROTEIN_ID AAZ22134.1 GB:DB_XREF GI:71063131 LENGTH 245 SQ:AASEQ MNLIRAILLLIFLSTPLKANTIYNLIKIPNLEIYEINTKNKLRYFYAARPFQLGTQKNIVCSNPNKKDLELKYKIIHKNLNRYSYDYLKKINLKYIVMCENLSISELYTAGIPDNIMKTLILDIKFNEKYFERVIHHEVFHVMHLQHKNIFNEEEWAKFNNFEFKYAECSTCTKNISLEKYQETDGFFTEYSKSTASEDMAEVYSHMIFLEKKEINQIRKLDPILNNKISYIENKIKEIDNSFTY GT:EXON 1|1-245:0| BL:SWS:NREP 1 BL:SWS:REP 17->231|SID1_CAEEL|1e-04|24.3|210/776| PROS 134->143|PS00142|ZINC_PROTEASE|PDOC00129| HM:PFM:NREP 1 HM:PFM:REP 109->147|PF10026|0.00014|28.9|38/195|DUF2268| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 17-18,20-20,25-25,45-45,53-74,245-246| PSIPRED ccHHHHHHHHHHHccccccccEEEEEEcccEEEEEEcccccEEEEEEcccccccccccEEEccccHHHHHHHHHHHHHHHHHccHHHHHHccccEEEEEccEEcccEEcccccccccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccEEEEEEcccEEEcccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //