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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ22143.1
DDBJ      :             Asp/Glu/Hydantoin racemase family
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  83/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:248 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   113->245 2vlbD PDBj 5e-10 24.1 %
:RPS:PDB   14->245 3dtvB PDBj 2e-40 20.7 %
:HMM:PFM   18->228 PF01177 * Asp_Glu_race 4e-23 21.2 193/217  
:BLT:SWISS 113->245 AMDA_BORBR 1e-09 24.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22143.1 GT:GENE AAZ22143.1 GT:PRODUCT Asp/Glu/Hydantoin racemase family GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1276409..1277155) GB:FROM 1276409 GB:TO 1277155 GB:DIRECTION - GB:PRODUCT Asp/Glu/Hydantoin racemase family GB:PROTEIN_ID AAZ22143.1 GB:DB_XREF GI:71063140 LENGTH 248 SQ:AASEQ MKLNKVEPKYISKSNPRIGLITLGSDFRIEKDFNNVIYGRDVDLYVNRIHCYNPLTNETLAKMADDITDVTKDILPDQKIDCVAYGCTSGTIAAGYDVIEKNVKLAKPEAKVTTPITSAIKALKAFNINKVSVFTPYTKSINDSVINYFNKENIAVDGLTYFDIESDLDIGKVDEEYLFEVLSKINLEDSEALFVSCTALPVLSIIDKLEKKMNKVILSSNQTLIWESLNAIGYKNSIEGFGKLFKFN GT:EXON 1|1-248:0| BL:SWS:NREP 1 BL:SWS:REP 113->245|AMDA_BORBR|1e-09|24.1|133/100| BL:PDB:NREP 1 BL:PDB:REP 113->245|2vlbD|5e-10|24.1|133/230| RP:PDB:NREP 1 RP:PDB:REP 14->245|3dtvB|2e-40|20.7|227/233| HM:PFM:NREP 1 HM:PFM:REP 18->228|PF01177|4e-23|21.2|193/217|Asp_Glu_race| OP:NHOMO 136 OP:NHOMOORG 99 OP:PATTERN 11------------11-1------------------------------------11211111------ --------------2---------11----------1-32--------------2--1-------12-11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------1---1--2--1111221111-----11-1--11511111111-------------------------------------1--1--2533--22221-----11-2------1-22321--111--1--2-2-121----------------------------------------------------1---------------------------------1---2-------1------1---1--------------------------------------------------------------------------1-------------------------------------------------------------------------1-1111-----------------------1-1--------------------------------------------------------------------------- ----------------1---------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 93.5 SQ:SECSTR #############ccccEEEEEccTTccccTTHHHHcTTTTccEEEEEccccccccTTcHHHHHHHHHHHHHHHHHHTTccEEEEccHHHHHTTcHHHHHHHHHHHHHHHcEEEHHHHHHHHHHHHTccEEEEEEcccHHHHHHHHHHHHHTTcEEEEEEEcccGGGGTTccccHHHHHHHHHHHHcTTccEEEEEccccccTTHHHHHHHHHcccEEEHHHHHHHHHHHHHTcccccccccGGG### DISOP:02AL 1-8| PSIPRED ccccccccccccccccEEEEEEccccccHHHHHHHHHcccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccccHHHccccHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHcccEEEHHHHHHHHHHHHcccccccccccHHcccc //