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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : aatA
DDBJ      :aatA         aspartate transaminase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  848/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:399 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->394 1j32A PDBj 5e-92 43.4 %
:RPS:PDB   1->394 1bjwA PDBj 1e-69 42.7 %
:RPS:SCOP  1->394 1b5oA  c.67.1.1 * 1e-67 43.7 %
:HMM:SCOP  1->399 1iayA_ c.67.1.4 * 8e-123 33.4 %
:RPS:PFM   41->389 PF00155 * Aminotran_1_2 5e-40 34.4 %
:HMM:PFM   31->391 PF00155 * Aminotran_1_2 1.5e-85 27.0 344/363  
:BLT:SWISS 1->398 AAT_RICBR e-144 61.3 %
:PROS 235->248|PS00105|AA_TRANSFER_CLASS_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20904.1 GT:GENE aatA GT:PRODUCT aspartate transaminase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(93960..95159) GB:FROM 93960 GB:TO 95159 GB:DIRECTION - GB:GENE aatA GB:PRODUCT aspartate transaminase GB:PROTEIN_ID AAZ20904.1 GB:DB_XREF GI:71061901 GB:GENE:GENE aatA LENGTH 399 SQ:AASEQ MSIISNSLKKIKPSPTIAVTQKARELKAAGKDVIGLGAGEPDFDTPDNIKQAAIKAINDGDTKYTAVDGTAALKDAIVKKFKRENNLDYTTDQVTVGAGGKHVIYNAMMATLNEGDEVIVPAPYWVSYPDMVLLAGGTPIILECNEKQGFKINPTELEKSITPKTKWIILNSPSNPTGACYTEGDIKGIADVLAKHPHVHILSDDIYEHVTYEGFKFFTIAQIDSLKERVLTMNGVSKAYSMTGWRIGYAAGPKEIIKAIAKIQSQSTTNPSSISQAAAVEALNGTQDFIKERAISFQERRNFVVKALNEIDGIECLNPDGAFYVFPSCKGLMGKKDTSGKELKTDTDFVQSLLENSGVAVVQGSAFGLEGFFRISYATSMENLKNALEKISTFCKSLN GT:EXON 1|1-399:0| BL:SWS:NREP 1 BL:SWS:REP 1->398|AAT_RICBR|e-144|61.3|398/399| PROS 235->248|PS00105|AA_TRANSFER_CLASS_1|PDOC00098| BL:PDB:NREP 1 BL:PDB:REP 8->394|1j32A|5e-92|43.4|376/388| RP:PDB:NREP 1 RP:PDB:REP 1->394|1bjwA|1e-69|42.7|377/381| RP:PFM:NREP 1 RP:PFM:REP 41->389|PF00155|5e-40|34.4|331/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 31->391|PF00155|1.5e-85|27.0|344/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 1->394|1b5oA|1e-67|43.7|378/382|c.67.1.1| HM:SCP:REP 1->399|1iayA_|8e-123|33.4|389/428|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 4866 OP:NHOMOORG 1105 OP:PATTERN 22213113333333215423222664454374433554444446544545666-34344561236-33 45B4565555625445444-442265434445444447552345445524418A8554113332657557547886553247355534455546--11243534473534--------------144353435235544444444555555554444233333554388782422222422222423412484899A9AAAB7ABA9AA475559AAA67765456555556833333333333333233333545257291419988771525955544443233355333444333342222222222222366766666548476999898A4845A776333436-21545554666224465573234653544411111428686555565533343433338-55855A567A41966A98B878588745238576778885555555565554555211111111111111111111111111113146254B8576667677455566A854555556957582444966666657575355454424222222255545419954667475555-66773454477577459531322222222322222224343633111372113121311111111211112112---4544------43563553334344434-3343444333333333333565431114445344444444453632333331-444464455666--1211111433357446222223-221123224554434222636666796A576664665434324323433331111121221333434433412223254334454--------1----------1--------2-------4353323222364 ----435-43213462434367386862323224433444444323344646753333322343422323245233312325453411-3734443354552268A-27537948851333354E6172EM5-65A2322623A52533143263544734555642B35A55676977*67546CGIa3Y967F9BBA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 399 STR:RPRED 100.0 SQ:SECSTR cccccHHHHTccccHHHHHHHHHHHHHHTTcccEEcccccccccccHHHHHHHHHHHHTTccccccTTccHHHHHHHHHHHHHHHcccccGGGEEEEcHHHHHHHHHHHHHccTTcEEEEEEcccTHHHHHHHHTTcEEEEEEccGGGTTcccHHHHHHHccTTEEEEEEEcccTTTcccccHHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccGGGTcTGcTTTTEEEEEEcTTTTcGGGccEEEEccHHHHHHHHHHHHTTTccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcTccccccccTTEEEEEcTTGGccccccETTTcccHHHHHHHHHHTTEEcEEcGGGTcTTEEEEEccccHHHHHHHHHHHGGGHcTcc DISOP:02AL 1-4| PSIPRED ccHHHHHHHHccccHHHHHHHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHccEEEEEEccccccccccHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEEcccHHHcccccccccHHccccccccEEEEEccHHHHcccccEEEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccEEEEEEcccccccccccccccccHHHHHHHHHHHccEEEEcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHcc //