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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : aceA
DDBJ      :aceA         isocitrate lyase
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  434/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
c.1.12f.11.1
:424 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->405 3i4eA PDBj e-143 62.1 %
:RPS:PDB   12->406 3e5bA PDBj 4e-96 61.0 %
:RPS:SCOP  12->252 1dquA  c.1.12.7 * 2e-77 39.1 %
:RPS:SCOP  281->338 1accA  f.11.1.1 * 7e-07 12.1 %
:HMM:SCOP  11->424 1f8mA_ c.1.12.7 * 1.6e-155 47.9 %
:RPS:PFM   73->242 PF00463 * ICL 3e-46 58.4 %
:HMM:PFM   10->252 PF00463 * ICL 4.9e-84 41.3 242/526  
:HMM:PFM   249->424 PF00463 * ICL 9e-72 49.1 173/526  
:BLT:SWISS 12->402 ACEA_BACHD e-152 67.2 %
:PROS 185->190|PS00161|ISOCITRATE_LYASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22044.1 GT:GENE aceA GT:PRODUCT isocitrate lyase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1182407..1183681) GB:FROM 1182407 GB:TO 1183681 GB:DIRECTION - GB:GENE aceA GB:PRODUCT isocitrate lyase GB:PROTEIN_ID AAZ22044.1 GB:DB_XREF GI:71063041 GB:GENE:GENE aceA LENGTH 424 SQ:AASEQ MSAENISYDLKRFAGIKRDYTPEEVERLRGSFKIEYSMCKHQSKKLWDLLNSENYINTLGSLSGNHAIQHAKAGLKAIYLSGWQVAADANTAGEMYPDQSLYPYDSAPKLVESMNNALIRADQIQHMELQDGEMKSNDRTDYMLPIIADGEAGFGGPLNVFELAKKFIKAGAAGVHFEDQLASEKKCGHMGGKVLVPTGTMIKNLKAARLAADIADVPLIILARTDANAAKLITNDFDENDKPFLTGERSPEGFYYVKHGIDQAISRGLAYAPYSDLIWCETATPNLEEAKKFADAIHKKFPGKLLAYNCSPSFNWKKHLSDAEIATFQQKISEMGYKFQFITLAGFHTQNIAIFELAEKYKTEGMTAYSKIQELEFAREKDGYTSVKHQREVGTSYFDAVSNTISSGKSSTTAMAGSTESEQF GT:EXON 1|1-424:0| BL:SWS:NREP 1 BL:SWS:REP 12->402|ACEA_BACHD|e-152|67.2|384/427| PROS 185->190|PS00161|ISOCITRATE_LYASE|PDOC00145| BL:PDB:NREP 1 BL:PDB:REP 12->405|3i4eA|e-143|62.1|391/412| RP:PDB:NREP 1 RP:PDB:REP 12->406|3e5bA|4e-96|61.0|382/397| RP:PFM:NREP 1 RP:PFM:REP 73->242|PF00463|3e-46|58.4|166/176|ICL| HM:PFM:NREP 2 HM:PFM:REP 10->252|PF00463|4.9e-84|41.3|242/526|ICL| HM:PFM:REP 249->424|PF00463|9e-72|49.1|173/526|ICL| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00463|IPR000918| GO:PFM GO:0008152|"GO:metabolic process"|PF00463|IPR000918| RP:SCP:NREP 2 RP:SCP:REP 12->252|1dquA|2e-77|39.1|233/513|c.1.12.7| RP:SCP:REP 281->338|1accA|7e-07|12.1|58/665|f.11.1.1| HM:SCP:REP 11->424|1f8mA_|1.6e-155|47.9|407/427|c.1.12.7|1/1|Phosphoenolpyruvate/pyruvate domain| OP:NHOMO 1008 OP:NHOMOORG 581 OP:PATTERN 11----1222222221-12111------1-12-----------------------------111--11 -11--1-222211122222-2211233233322222111212-1-----111222222----1-1111111-----------2----------------1-1----------------------------------11111---11--11----------1------11-1------------11111---21111111111111111112221111111122-1------11----------------------------------------------------------------------------------------------------------------------1-----------1------------1111-----111231121211111111111112------1--211-1111111111111--11211----1--11111111211-1-1------------------------------11121-465243334332222222322222124353434-144211122212132111--1-221111111--11111------------------1-1--222212--1-----------1--------------22-22-122222333323222232222232---1121------211111-2222222222-22122222222222212221111122122222222222222221-111111--111111111111---1111111111-2222---------------22222222221-11111111211111111----------111222222222222312122-------1---------------------------------------------------1---1-- ----12------11243335654676722222222222322332224334337621222333211221112211122122211111---45333321111223211-111------------------------------------------------1------------221-121--1111143763321231221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 423 STR:RPRED 99.8 SQ:SECSTR #cHHHHHHHHcTTTTccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHTTcccEEEcHHHHHHHccTTcccccccccccTTHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcTTccccHHHHHHHHHHHHHHTccEEEEEcccHHHHTcTcccccEEccHHHHHHHHHHHHHHHHHHTcccEEEEEEcTTTccEEcccccTTTGGGccTTccTTccEEccccHHHHHHHHHHHGGGccEEEEccccccHHHHHHHHHHHHHHcTTccEEEEccccccHHHHccHHHHHHHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTccTTcHHHHHTHHHHHHHHHHHcEEccccccGTTcHHHHHc DISOP:02AL 409-424| PSIPRED ccHHHHHHHcHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHccccEEEEcHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHHHHcccEEEEEEcccccccccccccccEEEcHHHHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHccEEEcccccccHHHHHHHHHHHcccccccEEEEcccccccccccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccEEEcHHHHccHHHHHHHHHHHccHHHHHHcccccccccc //