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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : aceF
DDBJ      :aceF         dihydrolipoamide S-acetyltransferase
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  763/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
a.9.1b.84.1c.43.1
:423 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->80 1qjoA PDBj 6e-16 48.7 %
:BLT:PDB   126->165 1zwvA PDBj 1e-05 37.5 %
:BLT:PDB   185->413 1b5sA PDBj 9e-47 41.9 %
:RPS:PDB   1->80 3cdxA PDBj 6e-15 15.4 %
:RPS:PDB   111->170 2cooA PDBj 1e-09 25.0 %
:RPS:PDB   197->413 1c4tA PDBj 8e-66 33.2 %
:RPS:SCOP  4->80 1gjxA  b.84.1.1 * 2e-17 45.5 %
:RPS:SCOP  126->164 1ebdC  a.9.1.1 * 8e-10 41.0 %
:RPS:SCOP  208->413 1c4tA  c.43.1.1 * 4e-66 34.5 %
:HMM:SCOP  1->98 1y8oB1 b.84.1.1 * 1.8e-20 32.7 %
:HMM:SCOP  115->165 1balA_ a.9.1.1 * 7.9e-10 35.3 %
:HMM:SCOP  178->421 1eafA_ c.43.1.1 * 1.5e-75 42.8 %
:RPS:PFM   126->158 PF02817 * E3_binding 3e-05 54.5 %
:RPS:PFM   190->411 PF00198 * 2-oxoacid_dh 3e-57 48.0 %
:HMM:PFM   192->414 PF00198 * 2-oxoacid_dh 9e-76 44.8 221/231  
:HMM:PFM   4->76 PF00364 * Biotin_lipoyl 8.9e-23 42.5 73/74  
:HMM:PFM   125->159 PF02817 * E3_binding 2.2e-11 40.0 35/39  
:HMM:PFM   46->122 PF00529 * HlyD 2.7e-05 23.3 73/306  
:BLT:SWISS 5->406 ODP2_RALEH 1e-78 43.6 %
:PROS 27->56|PS00189|LIPOYL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21252.1 GT:GENE aceF GT:PRODUCT dihydrolipoamide S-acetyltransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 419944..421215 GB:FROM 419944 GB:TO 421215 GB:DIRECTION + GB:GENE aceF GB:PRODUCT dihydrolipoamide S-acetyltransferase GB:PROTEIN_ID AAZ21252.1 GB:DB_XREF GI:71062249 GB:GENE:GENE aceF LENGTH 423 SQ:AASEQ MSDKEIKVPNIGEFKDVEVIEVLVSNGQSVSKNDPLITIESDKSSVEIPASFDGKIKSVKIKVGDRVSEGDLILTIEQSGEEEKKIEQKTIKEAEQVTNQNQVEKIAKVNPAQNTIKKDNSEISSASPKVRKFARELGVNINEIVGSERQGRIVEDDVKNFISSRINKAPDKTEVQPKKIVSEYSHSDFGEIEVKDMPRVKKLASTYLVNSWTTIPHVTNHDEADITEMEDFRTSLTDMYTGERKKITPLAFIVKALVASLKKFPSFNSSIDDIENGKITMKNYFHVGIAVDTPHGLMVPKIRNADNKSISYISNELKIVSDQCRNLKIDKKEFFGGSMTITSLGGIGGSFFTPIINYPEVAILGVGKAQKKQIFINGKFETRTMLPLSLSYDHRIIDGAEAARFNNDLKENLGKNFAYKLAV GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 5->406|ODP2_RALEH|1e-78|43.6|399/553| PROS 27->56|PS00189|LIPOYL|PDOC00168| SEG 81->96|eeekkieqktikeaeq| BL:PDB:NREP 3 BL:PDB:REP 4->80|1qjoA|6e-16|48.7|76/80| BL:PDB:REP 126->165|1zwvA|1e-05|37.5|40/52| BL:PDB:REP 185->413|1b5sA|9e-47|41.9|227/242| RP:PDB:NREP 3 RP:PDB:REP 1->80|3cdxA|6e-15|15.4|78/329| RP:PDB:REP 111->170|2cooA|1e-09|25.0|60/70| RP:PDB:REP 197->413|1c4tA|8e-66|33.2|214/226| RP:PFM:NREP 2 RP:PFM:REP 126->158|PF02817|3e-05|54.5|33/39|E3_binding| RP:PFM:REP 190->411|PF00198|3e-57|48.0|221/232|2-oxoacid_dh| HM:PFM:NREP 4 HM:PFM:REP 192->414|PF00198|9e-76|44.8|221/231|2-oxoacid_dh| HM:PFM:REP 4->76|PF00364|8.9e-23|42.5|73/74|Biotin_lipoyl| HM:PFM:REP 125->159|PF02817|2.2e-11|40.0|35/39|E3_binding| HM:PFM:REP 46->122|PF00529|2.7e-05|23.3|73/306|HlyD| GO:PFM:NREP 5 GO:PFM GO:0005515|"GO:protein binding"|PF02817|IPR004167| GO:PFM GO:0008152|"GO:metabolic process"|PF02817|IPR004167| GO:PFM GO:0008415|"GO:acyltransferase activity"|PF02817|IPR004167| GO:PFM GO:0008152|"GO:metabolic process"|PF00198|IPR001078| GO:PFM GO:0008415|"GO:acyltransferase activity"|PF00198|IPR001078| RP:SCP:NREP 3 RP:SCP:REP 4->80|1gjxA|2e-17|45.5|77/81|b.84.1.1| RP:SCP:REP 126->164|1ebdC|8e-10|41.0|39/41|a.9.1.1| RP:SCP:REP 208->413|1c4tA|4e-66|34.5|203/226|c.43.1.1| HM:SCP:REP 1->98|1y8oB1|1.8e-20|32.7|98/0|b.84.1.1|1/1|Single hybrid motif| HM:SCP:REP 115->165|1balA_|7.9e-10|35.3|51/51|a.9.1.1|1/1|Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex| HM:SCP:REP 178->421|1eafA_|1.5e-75|42.8|243/243|c.43.1.1|1/1|CoA-dependent acyltransferases| OP:NHOMO 2719 OP:NHOMOORG 977 OP:PATTERN 11------1111111---111---2111--11----------------------------1111---- 1221521211123132333-322222333332333325763434333433335564452233424253534-----------3---1-111--1--22233334333333333333333333332---1----11-34433---221111111-1--1-----11111121--111----111333331--324444444443444444464454444455344322222242233333333333333344432-1-22-1---111111111111111111111112211111-111111111111111111211111111111---1111111-1--111---------3--------------11311-13-2422222222225223222222244444433443-227226242422233232533344223234242222232222222222222222222222222221122222222222222222335631343343553444444433354444354543334344343324333446333312223433322333334432-1-2----------323133421333333-21-----------------------2--3223323343434333343333333333441-3323322222232222222222233322-222223322223222222323322242222222222222222222222222222222222222222223333333333223232222222222222223333323222324444333333333222222222222221223222223323344444443333333111-222221----------111111-1-11111111211111-------------221 33--444-733-3333332343344433333333333423333333333444443333333332222222222222222222222222-22232332222233545-3447466655424234445373Af4-74D3422524644444443253853449F38342434B54533534l4344559EC3A45394453 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 92.4 SQ:SECSTR cEEEEcccGGGEEEcccEEEEEcccTTcEEcTTcEEEEEEcccccEEEEccccEEEEEEEEEcccEEcTTcEEEEEEEEc##############################cccccccccccccccccHHHHHHHHHHTccGGGcccccTTccccHHHHHHHHHHHHTcccTTccccccccccccHHGGGcccccccccccccHHHHHHHHHHHcccEEEEEEEEEcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHcEEETcTcTEEEccccccEEEcEEETTEEEccEEccTTTccHHHHHHHHHHHHHHHHTTcccTTTTccccEEEEEcGGGTcccccccccTTccEEEEEcccEEEEEEETTEEEEEEEEEEEEEEETTTccHHHHHHHHHHHHHHHHHcHHHHH## DISOP:02AL 83-126, 142-152, 154-198| PSIPRED ccEEEEEccccccccccEEEEEEEccccEEccccEEEEEEEccEEEEEEcccccEEEEEEcccccEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccHHccccccccccHHHHHHHHHcccHHHcccccccccccHHHHHHHHccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHcccEEEEEEEEEHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccEEEEEEccccccEEEEcccccEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHHccccHHHHccccEEEEccccccccEEEcEEccccEEEEEccccEEEEEEEccEEEEEEEEEEEEEEcccEEEHHHHHHHHHHHHHHHcccHHHHHcc //