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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : acnA
DDBJ      :acnA         aconitate hydratase
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  772/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.8.2c.83.1
:889 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->888 2b3yA PDBj 0.0 49.7 %
:RPS:PDB   7->888 2b3yA PDBj 0.0 51.4 %
:RPS:SCOP  7->623 2b3xA2  c.83.1.1 * 0.0 52.3 %
:RPS:SCOP  628->888 2b3xA1  c.8.2.1 * 7e-98 50.2 %
:HMM:SCOP  5->625 2b3yA2 c.83.1.1 * 1.2e-224 46.7 %
:HMM:SCOP  626->890 2b3yA1 c.8.2.1 * 2.2e-86 44.0 %
:RPS:PFM   81->559 PF00330 * Aconitase e-158 70.0 %
:RPS:PFM   688->817 PF00694 * Aconitase_C 1e-35 55.0 %
:HMM:PFM   61->559 PF00330 * Aconitase 7.1e-158 40.3 462/465  
:HMM:PFM   693->816 PF00694 * Aconitase_C 2.2e-43 37.9 124/131  
:BLT:SWISS 1->888 ACON_LEGPH 0.0 60.8 %
:PROS 424->440|PS00450|ACONITASE_1
:PROS 490->503|PS01244|ACONITASE_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22128.1 GT:GENE acnA GT:PRODUCT aconitate hydratase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1258379..1261048) GB:FROM 1258379 GB:TO 1261048 GB:DIRECTION - GB:GENE acnA GB:PRODUCT aconitate hydratase GB:PROTEIN_ID AAZ22128.1 GB:DB_XREF GI:71063125 GB:GENE:GENE acnA LENGTH 889 SQ:AASEQ MKPGNQNSYNSLKTISINDRDYKYYSLVEAEKNGLDGISKLPKSLKVLLENLLRYEDDLSVTKSQIEAIKEWLKTKKSLTEIAYRPARVLLQDYTGIPAVADLAAMREAVKEKNKDPNTINPLSAVDLVIDHSVQVDKSANSDSFEKNVDIEFKRNGERYSFLKWGQQAFNNFRIVPPGTGICHQVNLEYLSKVVWSEKFQNEDYLFPDTLVGTDSHTTMVNGLSVLGWGVGGIEAEAGMLGQPISMLIPEVIGFEVKNKMPEGTTATDLVLTVVKMLRDKGVVGKFVEFYGEGLKNLTLADRATIANMAPEYGATCGFFPIDEETLKYLRFSGRDENTVNIVENYAKEQGLWANDQVEFTDTLSLDMSTVVPTISGPKRPQDKVLLTDASTGFKKVFEDATNRKEQHISKVSGTDYEIKDGSILIAAITSCTNTSNPNVLIGAGLLAKKAVELGLETKPWVKTSLAPGSQVVTDYLAKAGLNVFLDKLGFNLVGYGCTTCIGNSGPLPEEIVKAIDKENIYAVSVLSGNRNFEGRISPHIKANYLASPPLVVAYALAGHMEFDLYKEPLGKSKDGKDIFLKDIWPSNKEIEDTLRESLNAEMFVKRYSNVSEGPKQWQEIKTENTSIYNWDSSSTYVKKPPFFENLSDQPEGFKPIKEARPLLILGDMVTTDHISPAGNIQKESPTGEYFMEHQILPTDYNSYGSRRGNHEVMMRGTFANIRIRNEMAPGTEGGFTKLYPEEKVMPVYNAVEEYKKRGTDLVVIGGKEYGTGSSRDWAAKGTKLLGVKVVIAESFERIHRSNLIGMGVLPLQFTEGHDRVNLKLIGSELITVLQIEDGINASDHVQVEIKYASGDIKKIKTLCRIDTKNELEYYKNGGILQYVLRNMI GT:EXON 1|1-889:0| BL:SWS:NREP 1 BL:SWS:REP 1->888|ACON_LEGPH|0.0|60.8|885/891| PROS 424->440|PS00450|ACONITASE_1|PDOC00423| PROS 490->503|PS01244|ACONITASE_2|PDOC00423| BL:PDB:NREP 1 BL:PDB:REP 23->888|2b3yA|0.0|49.7|853/888| RP:PDB:NREP 1 RP:PDB:REP 7->888|2b3yA|0.0|51.4|869/888| RP:PFM:NREP 2 RP:PFM:REP 81->559|PF00330|e-158|70.0|416/434|Aconitase| RP:PFM:REP 688->817|PF00694|1e-35|55.0|129/130|Aconitase_C| HM:PFM:NREP 2 HM:PFM:REP 61->559|PF00330|7.1e-158|40.3|462/465|Aconitase| HM:PFM:REP 693->816|PF00694|2.2e-43|37.9|124/131|Aconitase_C| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00330|IPR001030| GO:PFM GO:0008152|"GO:metabolic process"|PF00694|IPR000573| RP:SCP:NREP 2 RP:SCP:REP 7->623|2b3xA2|0.0|52.3|610/629|c.83.1.1| RP:SCP:REP 628->888|2b3xA1|7e-98|50.2|255/259|c.8.2.1| HM:SCP:REP 5->625|2b3yA2|1.2e-224|46.7|614/0|c.83.1.1|1/1|Aconitase iron-sulfur domain| HM:SCP:REP 626->890|2b3yA1|2.2e-86|44.0|259/0|c.8.2.1|1/1|LeuD/IlvD-like| OP:NHOMO 2468 OP:NHOMOORG 1022 OP:PATTERN 11-2--1211211212-222222231122243222221212222222232333112-----3112-33 2322322222222222222-22222422222222222255222222311222212222--222123423222222222-221422111222212---1111214322232--------------1111222111222223222222111-1111111111111111211211111111111113333322122222222222222222222222222222222112222222312222222222222222222-------1------------111212-------222------------------------212222111-24-22111111121232221---2-21-2322222222221222222--2122322211111423334222222222222222222-22322522222122232232223232542333222222222222222222222221111111111-211111111111111111222422665353334334333333553333-343655671144412233523233332211143132222222232122312222212221-323233222222213212111111111--1-------1111122111332224332222223222222222222-1-3322-11--122322232222222222-2212221222222222223232222223232323332323223211122221-222222222222111311111111113222111112-111111113333333333413333334433343333321212212111111222222222223333333332234-111332222-------------------------------------12--2-222222 11--223-311-2246443644467654434444443444344444434655765454444444444434454454414544444444-46444465554444656-41445833463232343453438b3-4393333323323333233363633425C22225623924322222R11122435C4431132221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 882 STR:RPRED 99.2 SQ:SECSTR ######TTGGGEEEccTTcTTcEEEcGGGGccTTGGEEEGccHHHHHHHHHHHHTcccccccHHHHHHHHTHHHHTTTTcEEEEcccEEEEEHHHHHHHHHHHHHHHHHHHHTTccGGGccccccEEEEccccccccccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHcTTEEEEcTTcccHHHHHHHTTcccEEEEHGGGTTEEEEcEEEEccGGGGGGGGGTcEEEEccHHHHHHHHTTccEEEEcccEEEEEEEccccTTccHHHHHHHHHHHHHHHccTTcEEEEEcGGGTTccHHHHHHHHHTHHHHTccEEEccccHHHHHHHHHTTccHHHHHHHHHHHHHHTccccTTccccEEEEEEGGGcccEEEccccTTcEEEGGGHHHHHHHHHHccccTTcccccGGGTEEEEEETTcEEEEEEccHHHHTcHHHHHHHHHHHHHHHHTTccccTTcEEEEccccHHHHHHHHHTccHHHHHHTTccccccccGGGGTccccccHHHHHHHHHHTcccEEEEccccccTTcccTTccEEEEccHHHHHHHHHHccccccTTTcccEEETTTEEEcHHHHcccHHHHHHHHHHHccHHHHHHHHTTTTTccHHHHHccccccccccccTTcccccccGGGTTccccccccccEEEEEEEEEccccccHHHHccccccccccHHHHHHHHTTccGGGcccTGGGTTcHHHHHHTTTccTTcEETTTTEEEccEEEETTTTEEEEHHHHHHHHHHTTccEEEEcccccTcccccTHHHHHHHHTTEEEEEEccccHHHHHHHHHHTcEEEEEcTTccHHHHTccccccEEEcEccccccTTcEEEEEETcTTcTccEEEEEEccccHHHHHHHHHTcHHHHHHHHH# DISOP:02AL 1-12, 618-623, 625-627| PSIPRED cccccccHHHcccEEccccccEEEEcHHHHHHccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccEEEEEEEEEEEEccccHHHHHHHHHHHHHHHcccccHHHccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEHHHHccHHcccccccccEEcccEEEEccccccccccHHHHHccccHHHHHHHHHcccEEEEcccEEEEEEEEEEcccccHHHHHHHHHHHHccccccEEEEEEEccccccccHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccEEEEEEEEHHHHHHHHcccccccccEEcccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHcccHHHHHHcccEEcccccccccccccccccHHHHcccccccEEEEEEEccccccccccccccEEEEccHHHHHHHHHcccccccccccHHcccccccEEEEEEcccccHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccEEEcccccccccccccccccccccEEEEEEcccccHHHccccccccccccHHHHHHHccccHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEcHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHccEEEEEEccHHHHHHHHHHHccccEEEEcccccHHHHccccccEEEEEccHHHcccccEEEEEEEEEcccEEEEEEEEEEccHHHHHHHHcccHHHHHHHHcc //