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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ampG
DDBJ      :ampG         muropeptide permease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  366/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:458 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  19->454 1pv7A_ f.38.1.2 * 5.5e-32 23.6 %
:HMM:PFM   24->410 PF07690 * MFS_1 5.7e-22 24.3 333/353  
:BLT:SWISS 15->455 AMPG4_RICBR 3e-51 31.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21034.1 GT:GENE ampG GT:PRODUCT muropeptide permease GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 214052..215428 GB:FROM 214052 GB:TO 215428 GB:DIRECTION + GB:GENE ampG GB:PRODUCT muropeptide permease GB:NOTE AmpG GB:PROTEIN_ID AAZ21034.1 GB:DB_XREF GI:71062031 GB:GENE:GENE ampG LENGTH 458 SQ:AASEQ MIEIKKQSLSETFAVYFDKRMLRILLLGAISGFPWVLIGSSLSLWLKEEGLSRSTIGWAGLIFAVYAFNYLWAPLIDRFQIPYLTKKLGHRRGWIVLMQIAILACLVTWSFINPTENLALLITVGLIIAIASATQDITVDALRIEQIGEHESKSMAAGAAMAVVGWWSGYKLGGVIALFTAEYLENMGVTNYWQITFLILGILVILMNIGLMFVHEPLYTDRQKKQKETDKLIEGKLGSKNIITNFITWISSTLGGPIISFFRKNGFTIAVGILSFIFLFKIGEAFLGRMSIVFYKEIGFSKGDIAIYSKTLGWITTVMFTLLGGLFVIRSGVLKAMFVAGILMAATNLLFTVLAWSDKSELLFAVAVIFDDIAAAFATVAFVAFISLLVDRTYTATQYALLASIGTAGRTTLASSSGALVDWLNGDWGVFFIITAIMVIPSLICLWLIKDKLKLHER GT:EXON 1|1-458:0| BL:SWS:NREP 1 BL:SWS:REP 15->455|AMPG4_RICBR|3e-51|31.3|409/414| TM:NTM 10 TM:REGION 23->45| TM:REGION 53->75| TM:REGION 102->124| TM:REGION 158->180| TM:REGION 195->217| TM:REGION 241->262| TM:REGION 273->295| TM:REGION 324->346| TM:REGION 361->383| TM:REGION 428->450| SEG 154->168|smaagaamavvgwws| SEG 364->386|favavifddiaaafatvafvafi| HM:PFM:NREP 1 HM:PFM:REP 24->410|PF07690|5.7e-22|24.3|333/353|MFS_1| HM:SCP:REP 19->454|1pv7A_|5.5e-32|23.6|386/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 422 OP:NHOMOORG 371 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------11-1-------1----------------------------------------------11--1-1----------11322------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111------111111111111----------1-11311322--1------------2--121--1---------------1----111--------11113333333323333----11111111111111111111111111111111111111111111111111111111121111111111111111111111-1-------------------11-111-1---------------------1-----111131111111111111111111111111--11111------11111111111111111-111111111111111111111112111111111111111111111111111--111111111111---11111111111111-11111111111111122222221111111111111111111111211111111-11111111111111121112111111111-1-------------------------------------------------------- ---------------------------------------------------------------------------------------------1---------------------------------------------------------------11----1----------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-9, 219-230, 457-458| PSIPRED ccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //