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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : aprA
DDBJ      :aprA         adenylyl-sulfate reductase chain A
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  91/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.7.3c.3.1d.168.1
:619 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->611 2fjbA PDBj e-162 49.1 %
:RPS:PDB   37->439 1d4cA PDBj 4e-24 14.3 %
:RPS:PDB   537->606 3cirM PDBj 5e-08 27.5 %
:RPS:SCOP  31->248 1jnrA2  c.3.1.4 * 1e-28 51.6 %
:RPS:SCOP  240->374 1jnrA3  d.168.1.1 * 3e-22 46.3 %
:RPS:SCOP  370->466 1jnrA2  c.3.1.4 * 1e-11 48.5 %
:RPS:SCOP  490->612 1jnrA1  a.7.3.1 * 4e-27 37.8 %
:HMM:SCOP  1->473 1jnrA2 c.3.1.4 * 6.8e-67 25.7 %
:HMM:SCOP  474->614 1jnrA1 a.7.3.1 * 4.6e-44 33.3 %
:RPS:PFM   37->413 PF00890 * FAD_binding_2 1e-14 30.5 %
:RPS:PFM   490->584 PF02910 * Succ_DH_flav_C 2e-04 28.4 %
:HMM:PFM   12->241 PF00890 * FAD_binding_2 6.9e-21 25.8 225/421  
:HMM:PFM   490->606 PF02910 * Succ_DH_flav_C 9.5e-11 33.0 109/129  
:BLT:SWISS 85->218 NADB_PSEAE 5e-05 28.2 %
:BLT:SWISS 401->575 Y033_METJA 2e-04 26.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21654.1 GT:GENE aprA GT:PRODUCT adenylyl-sulfate reductase chain A GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 805989..807848 GB:FROM 805989 GB:TO 807848 GB:DIRECTION + GB:GENE aprA GB:PRODUCT adenylyl-sulfate reductase chain A GB:PROTEIN_ID AAZ21654.1 GB:DB_XREF GI:71062651 GB:GENE:GENE aprA LENGTH 619 SQ:AASEQ MAKHKTHFEDCDVLVVGGGMAGTGATFEARHWGRDMKIICVEKANIDRSGAVAQGLYAINCYMGMQWGENQPEDHVRYARNDLMGMVREDLGYDMARHVDSTVHMFDEWGLPMMKNEKTGRYLREGKWQIMIHGESYKPIVAEAAKKSADKIYNRIMITHLLMDEAQENRVGGAVGFNMRTGDFHVFRAKTVIVAAGGASHIFKPRAVGEGMGRTWYAPWSNGSAYALPIAVGAKMTQMENRIVLCRFKDGYGPVGAYFLHLKTYTQNANGENYEKKWYDQTKELVGEYIDHHPTPTCLRNHAFIQETIAGGGPIHMVTTEAFQDPHLETVGWENFLGMTVGQAVVWASQNIDPKYTNPELTTSEPYVMGSHATCSGAWVSGPEDLSPPEYFWGYNRMLTIDGLFGAGDTVGGSAHKFSSGSFTEGRLAAKAAVKYIQDKKAEGIKVTDKQCEDFKTAVFKPLETYQVAQNEITGGTVSPSYISPIQGLQRLQRIMDEYVGGIATNYMTNGNMLKRGLELLAWLEEDLEKVGAEDLHQLMRAWELKHRALTSQCVTEHTMFREETRWPGYYYRGDHMKLDDDNWHCLTVSRRDPKTGKFSLEKVPVYHIVDENEKKKAS GT:EXON 1|1-619:0| BL:SWS:NREP 2 BL:SWS:REP 85->218|NADB_PSEAE|5e-05|28.2|131/538| BL:SWS:REP 401->575|Y033_METJA|2e-04|26.0|150/539| SEG 15->26|vvgggmagtgat| SEG 518->529|lellawleedle| BL:PDB:NREP 1 BL:PDB:REP 6->611|2fjbA|e-162|49.1|603/642| RP:PDB:NREP 2 RP:PDB:REP 37->439|1d4cA|4e-24|14.3|398/570| RP:PDB:REP 537->606|3cirM|5e-08|27.5|69/504| RP:PFM:NREP 2 RP:PFM:REP 37->413|PF00890|1e-14|30.5|331/375|FAD_binding_2| RP:PFM:REP 490->584|PF02910|2e-04|28.4|88/114|Succ_DH_flav_C| HM:PFM:NREP 2 HM:PFM:REP 12->241|PF00890|6.9e-21|25.8|225/421|FAD_binding_2| HM:PFM:REP 490->606|PF02910|9.5e-11|33.0|109/129|Succ_DH_flav_C| GO:PFM:NREP 4 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02910|IPR004112| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02910|IPR004112| RP:SCP:NREP 4 RP:SCP:REP 31->248|1jnrA2|1e-28|51.6|217/356|c.3.1.4| RP:SCP:REP 240->374|1jnrA3|3e-22|46.3|134/145|d.168.1.1| RP:SCP:REP 370->466|1jnrA2|1e-11|48.5|96/356|c.3.1.4| RP:SCP:REP 490->612|1jnrA1|4e-27|37.8|119/141|a.7.3.1| HM:SCP:REP 1->473|1jnrA2|6.8e-67|25.7|339/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 474->614|1jnrA1|4.6e-44|33.3|141/141|a.7.3.1|1/1|Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain| OP:NHOMO 108 OP:NHOMOORG 96 OP:PATTERN -----------------1211--1-------------------------------------------- --------------111---------------------11---------------------------1----------------------------------------------------------11--1--1---------------------------------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------11-11------------22----1-----11-311111-1-1----1--1-1------------1-1-1----1-------------21-11-11-1---------------1--------------------------1-------------------------------1----------111111-----11--------1--1-1---11---------------2-------------------1111111121222---------------1-2---------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------11111------111-11-1--1--1------------------------------------------11--------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 606 STR:RPRED 97.9 SQ:SECSTR #####EEEEEccEEEEcccHHHHHHHHHHHHHTccccEEEEcccccccTTGGGccccEEccccHHHTccccHHHHHHHHHHHTTTcccHHHHHHHHHTHHHHHHHHHHTTccccEEEccTTcccccEEEcTTTHHHHHHHHHHHHHHTTcEEETTEEEEEEEcccEEcccccEEEEEETTTTEEEEEEccEEEEcccccTTcHHHHHHHcGGGcccccTTcccHHHHHHHHTTccEEcTTcEEEEEEETTTTEEccTHHHHTTcEEEcTTccccccTTccHHHEEHHHHHHTcTTccEEEEEEHHHHHTcTTHHHHHHTTccEEEccHHHHHHHHTccHHHHHHHHHHHHHHHHHTccccccccccccccccccEEEEEEccEEcccTTcEEEcTTTccEEEEEEEcGGGcccccTTcccTHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHTTccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHTTcTTTcccccHHHHHHHTTHHHHHHTTccccccccccccccHHHHHHHHHTTTTTHHHHHHHHHHHcccccccccccccccccccccccccccccEEccTcEEccccccccccccc######## DISOP:02AL 1-3, 615-619| PSIPRED cccccEEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEEEcccccccccHHccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccHHHHHHHHHHHHHcccEEEHHEEEEEEEEEcccccEEEEEEEEEccccEEEEEEEcEEEEEcccccccccccccccccccccccccccHHHHHHHHHHcccEEccccEEEcccccccccccccEEcccccEEEccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHccHHHHHHHHHccHHHHHHHHHHcccccccccEEEEcccccccccEEEcccEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHcEEEEEEEEccccEEEEEEEEEEEcccccHHcccc //