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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : aprB
DDBJ      :aprB         adenylyl-sulfate reductase chain B
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  33/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:156 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->133 1jnrB PDBj 6e-28 46.5 %
:RPS:PDB   2->59 1dwlA PDBj 2e-09 25.9 %
:RPS:SCOP  3->133 1jnrB  d.58.1.5 * 7e-20 44.5 %
:HMM:SCOP  2->104 1jnrB_ d.58.1.5 * 1.3e-18 25.7 %
:RPS:PFM   59->143 PF12139 * APS-reductase_C 1e-14 54.4 %
:HMM:PFM   59->141 PF12139 * APS-reductase_C 3e-32 50.6 79/84  
:HMM:PFM   6->24 PF00037 * Fer4 3.5e-08 42.1 19/24  
:HMM:PFM   36->57 PF00037 * Fer4 2.9e-08 40.9 22/24  
:BLT:SWISS 2->57 FER2_DESNO 5e-09 38.9 %
:PROS 10->21|PS00198|4FE4S_FER_1
:PROS 42->53|PS00198|4FE4S_FER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21653.1 GT:GENE aprB GT:PRODUCT adenylyl-sulfate reductase chain B GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 805519..805989 GB:FROM 805519 GB:TO 805989 GB:DIRECTION + GB:GENE aprB GB:PRODUCT adenylyl-sulfate reductase chain B GB:PROTEIN_ID AAZ21653.1 GB:DB_XREF GI:71062650 GB:GENE:GENE aprB LENGTH 156 SQ:AASEQ MSTFVYMTRCDGCGHCVDICPSDIMHIDENIRRAVNIEPNFCWECYSCVKACPNHAIDVRGYADFAPMGHSVRVRREEEKGTISWKIKFRNGTTKDFVSPITTKPWGKFIPKLAEGEKPNQGEINSQMLYTEPNGLNIDGKLPVVPKDSFKKGVYY GT:EXON 1|1-156:0| BL:SWS:NREP 1 BL:SWS:REP 2->57|FER2_DESNO|5e-09|38.9|54/59| PROS 10->21|PS00198|4FE4S_FER_1|PDOC00176| PROS 42->53|PS00198|4FE4S_FER_1|PDOC00176| BL:PDB:NREP 1 BL:PDB:REP 3->133|1jnrB|6e-28|46.5|127/149| RP:PDB:NREP 1 RP:PDB:REP 2->59|1dwlA|2e-09|25.9|58/59| RP:PFM:NREP 1 RP:PFM:REP 59->143|PF12139|1e-14|54.4|79/80|APS-reductase_C| HM:PFM:NREP 3 HM:PFM:REP 59->141|PF12139|3e-32|50.6|79/84|APS-reductase_C| HM:PFM:REP 6->24|PF00037|3.5e-08|42.1|19/24|Fer4| HM:PFM:REP 36->57|PF00037|2.9e-08|40.9|22/24|Fer4| RP:SCP:NREP 1 RP:SCP:REP 3->133|1jnrB|7e-20|44.5|128/149|d.58.1.5| HM:SCP:REP 2->104|1jnrB_|1.3e-18|25.7|101/149|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 39 OP:NHOMOORG 38 OP:PATTERN -----------------1111--1-------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------11--1--1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1-------------------------1-1--111--------1--1-1-----------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------2-------------------1111111111111-----------------1---------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 130 STR:RPRED 83.3 SQ:SECSTR #cEEEcccccccccGGGGTcTTTEEEEEccccEEEccTTcccGGGGTGGGGcTTccEEEcTTccccHHHHHHHHHHHHTTccccccEEcTTccEEEEEEEcccccTTcccT##TTTccccHHHHTccccTTTT####################### PSIPRED cccEEEccccccccHHHHHcccccEEEEccccEEEEEccccccccccHHHHcccccEEEEccEEccccccEEEEccccccccccEEEEcccccEEEEEccccccccccccccccccccccHHHcccHHHHccccEEEccccccEEccccEEccccc //