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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : argD
DDBJ      :argD         Acetylornithine aminotransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  774/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:388 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->368 2e54A PDBj 2e-77 41.2 %
:RPS:PDB   6->368 3dodA PDBj 4e-79 25.3 %
:RPS:SCOP  15->368 1d7rA  c.67.1.4 * 5e-77 29.2 %
:HMM:SCOP  12->388 1zodA1 c.67.1.4 * 5.2e-117 38.8 %
:RPS:PFM   19->334 PF00202 * Aminotran_3 6e-58 39.2 %
:HMM:PFM   17->335 PF00202 * Aminotran_3 1.3e-100 42.5 318/339  
:BLT:SWISS 2->368 ARGD_RHILO 8e-98 48.0 %
:PROS 210->247|PS00600|AA_TRANSFER_CLASS_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21324.1 GT:GENE argD GT:PRODUCT Acetylornithine aminotransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 489215..490381 GB:FROM 489215 GB:TO 490381 GB:DIRECTION + GB:GENE argD GB:PRODUCT Acetylornithine aminotransferase GB:PROTEIN_ID AAZ21324.1 GB:DB_XREF GI:71062321 GB:GENE:GENE argD LENGTH 388 SQ:AASEQ MSALAKNYNRKKISFKYGKGSFLYSTNGKKYLDFVQGIAVNSLGHANPNLIKAVNKQSKKLWHVSNAFIIPEGEKLAKRLAKKTFADFIIFQNSGAEATEAAIKVARRYFYSIGQPSKNRILCVKNSFHGRTLATIYASGSKKMTEGFGPKVDGFDHFEFGNHKDFKKKITKKTAAIMVETVMGEGGIKVIPNWCLKELRKICDKKKILLILDEVQCGIGRSGNFFAFENSKIKPDIVPIAKGIGGGFPLGAVLMNKKVASGMTAGTHGSTFGGNPLAMSVGNAVLDQISKKGFLSNVKKLSKYFHSELNILRKKFPKIIKEVRGVGLLIGLQLHNDQTKFIQKLMDNKLLTIRAAENVIRILPPLNVKKEEIKIAINIIEKVCSTYK GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 2->368|ARGD_RHILO|8e-98|48.0|367/399| PROS 210->247|PS00600|AA_TRANSFER_CLASS_3|PDOC00519| SEG 167->177|kkkitkktaai| SEG 199->212|lrkicdkkkillil| SEG 369->382|kkeeikiainiiek| BL:PDB:NREP 1 BL:PDB:REP 4->368|2e54A|2e-77|41.2|362/385| RP:PDB:NREP 1 RP:PDB:REP 6->368|3dodA|4e-79|25.3|352/417| RP:PFM:NREP 1 RP:PFM:REP 19->334|PF00202|6e-58|39.2|311/336|Aminotran_3| HM:PFM:NREP 1 HM:PFM:REP 17->335|PF00202|1.3e-100|42.5|318/339|Aminotran_3| GO:PFM:NREP 2 GO:PFM GO:0008483|"GO:transaminase activity"|PF00202|IPR005814| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00202|IPR005814| RP:SCP:NREP 1 RP:SCP:REP 15->368|1d7rA|5e-77|29.2|346/431|c.67.1.4| HM:SCP:REP 12->388|1zodA1|5.2e-117|38.8|369/0|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 4596 OP:NHOMOORG 1031 OP:PATTERN 22211123555555531222222322231142122233333331121111232154523233227-24 37557323332221E6666-6A227E646666E88846DF55553333143462433311A581A5DCEA71111121--2162434423221311-1144556554515-------1-11111-22322322323777661115622221132222222222313343313233333233235444411-758AAAAA9999B9A9997977879BC65466232222228716666665666666656636-------2---2222-----231111-------121------------------------1--111----35155-------2-2426621111-3--422342242323222232221143134441111153B695545556378887786879-344325275L42D999BAI99ECE66431589868879B33333333555134472222222222---------------21222135439AA97EFFDEE8BBB9CCBCDDDD6BCDB466512658577227485995522233642222222433353-56662433362232333322554112133464122333333122222222222333226533538233574444554445354443441-1444221-22256872566554644456-56656445565465565559B9697A25555455555555555643155551-234444344444--13-----444434687444223222123221888876634377ABABAG9E7FEDB6ACD321112212543334555557534244444533311212312332222------------------------------------1222212111532 11--333-1---11336535453858555222233343332333335446B9CA3444344322523532322245324454432524-46464445354353454-56343645473424444752736U4-4442423624423343243343B54336A29555444H45332561I121558AAI5687463847 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 368 STR:RPRED 94.8 SQ:SECSTR GccccHHHHHccccEEEEEcTEEEETTccEEEETTHHHHTcccccccHHHHHHHHHHHTTcccccccccccHHHHHHHHHHHHccTTEEEEEccHHHHHHHHHHHHHHHHHHTTcTTccEEEEEccEEEcccccTHHTcccTTTTcccccHHHHHHHHHHHHHHHHHHHGGGEEEEEEEccEEcTTTcEEccTTHHHHHHHHHHHTTcEEEEEcTTTTTTTTccccGGGGGTccccEEEEcGGGGTTcccEEEEEEHHHHGGccccccccTTTTcHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTcTTTTEEEEEEETTEEEEEEccTTTTHHHHHHHHTTEEccEETTEEEEcccTTc#################### PSIPRED ccccccccccccEEEEEccccEEEEccccEEEEHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHccccccccccccccccccEEcccccHHHHHHHccccEEEEEEEccccccccEEccHHHHHHHHHHHHHHccEEEEccccccccccccccccHHccccccEEEEEHHHcccccEEEEEEcHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHEEEcccccEEEEEEEcccHHHHHHHHHHcccEEEcccccEEEEcccccccHHHHHHHHHHHHHHHHHcc //