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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : argE
DDBJ      :argE         acetylornithine deacetylase
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  613/915 : Eukaryota  68/199 : Viruses  0/175   --->[See Alignment]
c.56.5d.58.19
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->382 3ic1B PDBj 1e-21 32.3 %
:RPS:PDB   1->386 1cg2A PDBj 1e-41 19.0 %
:RPS:SCOP  14->210 1vgyA1  c.56.5.4 * 2e-34 27.9 %
:RPS:SCOP  186->291 1cg2A2  d.58.19.1 * 3e-11 23.7 %
:HMM:SCOP  8->392 1lfwA1 c.56.5.4 * 1.8e-53 36.1 %
:RPS:PFM   79->381 PF01546 * Peptidase_M20 2e-15 31.4 %
:HMM:PFM   79->387 PF01546 * Peptidase_M20 4.3e-30 31.8 157/171  
:BLT:SWISS 18->386 ARGE_MYXXA 5e-39 33.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22131.1 GT:GENE argE GT:PRODUCT acetylornithine deacetylase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1262016..1263206 GB:FROM 1262016 GB:TO 1263206 GB:DIRECTION + GB:GENE argE GB:PRODUCT acetylornithine deacetylase GB:PROTEIN_ID AAZ22131.1 GB:DB_XREF GI:71063128 GB:GENE:GENE argE LENGTH 396 SQ:AASEQ MSTENSSDQLFNNSVKILTDLISFKTISGEDNSSLINYCDEILNKLGATSFKTFDDEKKRVNLFATLKAKKPSNKKPIILSGHTDVVPVSKGWSTDPFVATIKDDKLFGRGSCDMKGFIACTLAFAPIYAKANLDRDIHFSYTFDEETACIGAPILIEELKKRGVKDGICIIGEPTNMKIIDAHKGCYEYTTYFEGLAGHSSAPHKGVSAVEYASRYVNKLIELREELKERSPKDSIFDPPHSTLSIGGIFGGIAHNVIADKCHVNWETRPVVKEDGVFLNAKIDKYANEILLPDMKKVFPNASIKKKIIGEVTGFDRDEKSNACELVSSLTGDNTREVVSFGTEAGLFQEIGISTVVCGPGSIEQAHKIDEFIILDELKKCLSLLDGIKEKSVIN GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 18->386|ARGE_MYXXA|5e-39|33.2|355/380| SEG 220->231|klielreelker| BL:PDB:NREP 1 BL:PDB:REP 15->382|3ic1B|1e-21|32.3|328/369| RP:PDB:NREP 1 RP:PDB:REP 1->386|1cg2A|1e-41|19.0|364/389| RP:PFM:NREP 1 RP:PFM:REP 79->381|PF01546|2e-15|31.4|283/308|Peptidase_M20| HM:PFM:NREP 1 HM:PFM:REP 79->387|PF01546|4.3e-30|31.8|157/171|Peptidase_M20| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01546|IPR002933| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01546|IPR002933| RP:SCP:NREP 2 RP:SCP:REP 14->210|1vgyA1|2e-34|27.9|190/262|c.56.5.4| RP:SCP:REP 186->291|1cg2A2|3e-11|23.7|93/113|d.58.19.1| HM:SCP:REP 8->392|1lfwA1|1.8e-53|36.1|244/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 1266 OP:NHOMOORG 727 OP:PATTERN 1122211222222122-1111--11---114----11-----1111111----111232211112--- 115-1-1--------11----1--12-----1-1-1131-------21112-1-2111--112-112122111111--11--1--11-11---1---111-1-1111111--------------------------12222---11--1----------------------------------1--11--1--2111111111121112121112111--13-1-11111151-11111-11111111233331-3-33-31-1122233121--1--1111----1-----------------------------------1-2-1------------3--1---2---------11-1---1-1---12--2-1222211111223231113323111111111112-222223241321433222222222431121334344444222222222331121111-11111--11111111111111111-122221123233333243222223333222222334434411444223223242441211111211111111111111-21-1--1--1-------------12112-1-11111111111111-11-111111111222222322222111112211114122122---211221122222322222222222222-2222222222222222223463222222222222222222222222222222122222222222211131111122221123322221221111211311111122222233333334233332344---------12221222222222222222222222222111-11------------1----------------------------1-11---1--1- -----1--441-1221-4112323-3311----2321---------322244432211----322-1-----211-----1---11----6---2-------1---------------------------------------------------1----111-111-1-1-33-------111-----22----2212- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 390 STR:RPRED 98.5 SQ:SECSTR HHHHHHHHHHHHHHHHHHHHHHTccccTTcHHHHHHHHHHHHHHHTTcEEEEEccTTcccEEEEEEEEcccccccccEEEEEEccccccTTHHHHcccccEEETTEEEcTTTTTTHHHHHHHHHHHHHHTTcccccEEEEEEEccGGGTTTTTHHHHHHHHHHccEEEEcccEETTccEEEcEEcEEEEEEEEEEcccEETTcGGGcccHHHHHHHHHHHHHHcccTcccTHHGGGccTTTTEEEEEEEEEEcccTTEEccEEEEEEEEEEccHHHHHHHHHHHHHHHTccccTTcETTTccEEEEEEEccccEEcHHHHHHHHHHHHHHHHHTTEEcccccccTHHHHGGGcccEEccccEEEcTTcccccEEEGGGHHHHHHHHHHHc###### DISOP:02AL 1-3| PSIPRED cccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEEEEccccccccEEEEEEccccccccccccccccccEEccccEEEccccccHHHHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEccEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEccccccEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHccccEEEEcccccccccccccEEEHHHHHHHHHHHHHHHHHHHcc //