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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : argJ
DDBJ      :argJ         ArgJ family
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  524/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
d.154.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   45->384 1vz7D PDBj 6e-42 32.8 %
:RPS:PDB   11->320 2drhB PDBj 2e-42 12.8 %
:RPS:SCOP  3->384 1vz6A  d.154.1.2 * 3e-60 32.6 %
:HMM:SCOP  1->384 1vz6A_ d.154.1.2 * 1.3e-110 42.4 %
:RPS:PFM   46->387 PF01960 * ArgJ 3e-71 44.8 %
:HMM:PFM   2->387 PF01960 * ArgJ 2.7e-139 44.6 368/388  
:BLT:SWISS 47->387 ARGJ_CAUCR 6e-64 41.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21335.1 GT:GENE argJ GT:PRODUCT ArgJ family GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 502576..503739 GB:FROM 502576 GB:TO 503739 GB:DIRECTION + GB:GENE argJ GB:PRODUCT ArgJ family GB:PROTEIN_ID AAZ21335.1 GB:DB_XREF GI:71062332 GB:GENE:GENE argJ LENGTH 387 SQ:AASEQ MVMFYFRDGANYASVYTQSKIVSENIKWNLNIKSKKISSLIINTRNANAFTGSDGYKGLKEIAEEAALQLTKKQTEDEDFPKKISSNQVLFGCTGTIGEKYPTEKIKKNIPELIKKIKYTQNKFTWMKAALGIMTTDLQPKISMEECKIGNKNVKIYGIAKGSGMIFPNMATTLGYVFTDADLSNDILNKLLKKNINTTFNAISCDGDTSTNDMVSIFSTGKVKNSIINNINDKKIFSFDKALHSVLLNLSKRVVKDGEGATKFITINIVKSKSEKEARVIAFSIANSNLVKTAIAGEDPNWGRIIMAIGKSGVKIDLKKLAINFGGIKIIEKGQIFKYYKENEATNYMKSQSIDISVDLNMGSKSFTAYTMDLTKKYIEINADYRS GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 47->387|ARGJ_CAUCR|6e-64|41.5|325/403| SEG 25->43|nikwnlnikskkissliin| SEG 222->236|kvknsiinnindkki| BL:PDB:NREP 1 BL:PDB:REP 45->384|1vz7D|6e-42|32.8|308/374| RP:PDB:NREP 1 RP:PDB:REP 11->320|2drhB|2e-42|12.8|265/353| RP:PFM:NREP 1 RP:PFM:REP 46->387|PF01960|3e-71|44.8|324/388|ArgJ| HM:PFM:NREP 1 HM:PFM:REP 2->387|PF01960|2.7e-139|44.6|368/388|ArgJ| GO:PFM:NREP 2 GO:PFM GO:0004358|"GO:glutamate N-acetyltransferase activity"|PF01960|IPR002813| GO:PFM GO:0006526|"GO:arginine biosynthetic process"|PF01960|IPR002813| RP:SCP:NREP 1 RP:SCP:REP 3->384|1vz6A|3e-60|32.6|350/376|d.154.1.2| HM:SCP:REP 1->384|1vz6A_|1.3e-110|42.4|356/383|d.154.1.2|1/1|DmpA/ArgJ-like| OP:NHOMO 695 OP:NHOMOORG 664 OP:PATTERN -----------------------1--------1111111111111111111111-------------- 1-11111111111111111-111111111111111111111112111-1111111111--111112111111111111--21111111-------------------------------------11111111111222221111-11111111111111111111122111111111111111111111--211111111111111111111111111111111111111-1-11111111111111-11-1-------1---11-------11-111-------111------------------------1--111-----1-21-------1-111111---1-1--111111111111-11111---1111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111---11111---------------------11111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111121-1111-111-------1-------1111111----111--------------------------1111------------------------------------------------------------------------------------------------------11111---------------111111111111111111111111111111--------1----------------------------1112111111-------------------------------------11--11111111 ----11--------1-1121111111111111111111111111112211111111111111111111111111111-1111111111-12111111111111111-11-------------------------------------------------------------1----11118111112131111111111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 375 STR:RPRED 96.9 SQ:SECSTR ##########EEEEEEEEEcccccccHHHHHHHcEEcccEEEEEGGGHHHHHHHHHHHHHHHcTTcTTTcTcTTGGTccccccccccEEEEEccTTTccGGGccccHHHHHHHHHHccGGTTcEEEEEEEEETTEEEEEEEEEEEccccGGGGcccTTccHHHHTTTcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHTTccccTTccEEEEEEEEEEEEETTcccccccccccccEEETTcccccccccccGGGcHHHHHHHcTTccHHHHHHHHHHHHHHHHHHHcccEEcGGTccGcEEccccHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEEEcccccEEEEEEEEcccHHHHHHTccc## DISOP:02AL 386-388| PSIPRED cEEEEEccccEEEEEEccccccccHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHEEEEEcccccEEccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccEEEEEEEEccEEEEEEEEEcccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHcccccccccHHHEEEEEccEEEEEcccccccccHHHHHHHHccccEEEEEEccccccEEEEEEccccHHHEEccccccc //