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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : bax
DDBJ      :bax          Bax protein (hydrolyses peptidoglycan)
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  135/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.2.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   261->355 2bfcA PDBj 1e-04 14.4 %
:RPS:SCOP  229->355 153lA  d.2.1.5 * 4e-04 7.6 %
:RPS:PFM   232->340 PF01832 * Glucosaminidase 8e-07 34.3 %
:HMM:PFM   228->352 PF01832 * Glucosaminidase 4.5e-27 31.4 118/134  
:HMM:PFM   41->96 PF01594 * UPF0118 0.00069 21.4 56/327  
:BLT:SWISS 152->350 BAX_ECOLI 4e-21 32.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21200.1 GT:GENE bax GT:PRODUCT Bax protein (hydrolyses peptidoglycan) GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 370252..371367 GB:FROM 370252 GB:TO 371367 GB:DIRECTION + GB:GENE bax GB:PRODUCT Bax protein (hydrolyses peptidoglycan) GB:PROTEIN_ID AAZ21200.1 GB:DB_XREF GI:71062197 GB:GENE:GENE bax LENGTH 371 SQ:AASEQ MRKKTIIRKKLTSFFETAKNLKKKNKLDAQKSGLDNLSRTFLSSLIIISIFFIAPLAINLTKEKMILSKDYENNSKNNLKKLLENKTTKLDEQLNKKFLYEDVLTFDEQPSDAILLSAATIEELFKSTNYNLKDVRENKLVKPINLDLLPKEIGKIENTKKRKELFIQIILPLVIDENNSIKLDRIKLFSILNKSKNTKTEQEWLNIKFKQYGVVNKDLSTLKIRMDEVPVSMAIAQAAKETGWGTSRFAQEGNALFGQWTWSGEGIKPADAEDDSTHKVMRFKVLQASVKAYQRNLNTHSSYKDFRSARAELRDEGKELDSMILTEYLDKYAETGKEYVKILQQIIRQNDLTDFDDAKLLPSSKDLESLI GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 152->350|BAX_ECOLI|4e-21|32.5|194/274| TM:NTM 1 TM:REGION 37->59| SEG 19->27|knlkkknkl| SEG 41->58|flssliiisiffiaplai| SEG 72->90|ennsknnlkkllenkttkl| RP:PDB:NREP 1 RP:PDB:REP 261->355|2bfcA|1e-04|14.4|90/371| RP:PFM:NREP 1 RP:PFM:REP 232->340|PF01832|8e-07|34.3|102/133|Glucosaminidase| HM:PFM:NREP 2 HM:PFM:REP 228->352|PF01832|4.5e-27|31.4|118/134|Glucosaminidase| HM:PFM:REP 41->96|PF01594|0.00069|21.4|56/327|UPF0118| GO:PFM:NREP 2 GO:PFM GO:0004040|"GO:amidase activity"|PF01832|IPR002901| GO:PFM GO:0009253|"GO:peptidoglycan catabolic process"|PF01832|IPR002901| RP:SCP:NREP 1 RP:SCP:REP 229->355|153lA|4e-04|7.6|118/185|d.2.1.5| OP:NHOMO 153 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------11------------------------------1--------------------------------------------------------------------------------1------------------------------1-111111----------111-----11122111212111-1211112232123-----1-------11---1-1111111111-1111111111111111111111--1111111111111111111-111111------------------------------111--------------------------1-----------------211112111122211111111111---------------------------------------------------------------11-1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 127 STR:RPRED 34.2 SQ:SECSTR ####################################################################################################################################################################################################################################ccHHHHHHHHHHHHTTTTTccTTccTTcEETTccccccHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccGGGGcTTccccccHHHHHHHHHHHHHHHHHGGGccGGGc################ DISOP:02AL 1-4, 21-32, 71-81, 367-368| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHccccccccccHHccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccEEEEEcccccEEEEEcccEEEEEEEcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHcEEEccccccHHHcc //