[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : cdsA
DDBJ      :cdsA         phosphatidate cytidylyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  595/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
:220 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   93->212 PF01148 * CTP_transf_1 5e-12 42.1 %
:HMM:PFM   12->215 PF01148 * CTP_transf_1 5.8e-41 30.9 194/259  
:BLT:SWISS 63->218 CDSA_STAAW 8e-20 40.5 %
:PROS 178->204|PS01315|CDS
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21724.1 GT:GENE cdsA GT:PRODUCT phosphatidate cytidylyltransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 876184..876846 GB:FROM 876184 GB:TO 876846 GB:DIRECTION + GB:GENE cdsA GB:PRODUCT phosphatidate cytidylyltransferase GB:PROTEIN_ID AAZ21724.1 GB:DB_XREF GI:71062721 GB:GENE:GENE cdsA LENGTH 220 SQ:AASEQ MNSNIKKRILTSILLIALLIGMFFYSYIMIISLIIIAIISWIEFYALISKIFKKDILKDKFFRFSYKALSLIYLSGLVYLIFTIESENSNLKIYLLYSVLIAILSDIGGLVCGKIFKGKKLTKISPNKTISGSIGSFMFSMLLIPFFYKVQIDQSIVNLFLITIIISLTSQLGDLFISLLKRKAKVKDTSDLLPGHGGVLDRIDGIIFAIPLGIFLFIFI GT:EXON 1|1-220:0| BL:SWS:NREP 1 BL:SWS:REP 63->218|CDSA_STAAW|8e-20|40.5|153/260| PROS 178->204|PS01315|CDS|PDOC01019| TM:NTM 7 TM:REGION 9->26| TM:REGION 32->52| TM:REGION 60->82| TM:REGION 93->115| TM:REGION 129->151| TM:REGION 157->179| TM:REGION 196->218| SEG 9->20|iltsillialli| SEG 23->45|ffysyimiisliiiaiiswiefy| SEG 47->62|liskifkkdilkdkff| SEG 161->170|litiiislts| RP:PFM:NREP 1 RP:PFM:REP 93->212|PF01148|5e-12|42.1|114/262|CTP_transf_1| HM:PFM:NREP 1 HM:PFM:REP 12->215|PF01148|5.8e-41|30.9|194/259|CTP_transf_1| GO:PFM:NREP 2 GO:PFM GO:0016020|"GO:membrane"|PF01148|IPR000374| GO:PFM GO:0016772|"GO:transferase activity, transferring phosphorus-containing groups"|PF01148|IPR000374| OP:NHOMO 685 OP:NHOMOORG 613 OP:PATTERN -------------------------------------------------------------------- --1-111-111----------1--------------11---11-----1---111---11--11-1-11111---1111-----1111111111111--121111-1--1--------------11-1-11--111111--111------11111----111-1---111-1-11111-11-111---111-111111111111111111111111111--11-11111111-111111111111111111111111--11--11111111111111111111111111-----------11111111111111111111111111-1111111111111--1111--111-1---11111111----1--2-1-1-----111111-----111-1------------------------1111----11-111--1-1--1111----------------1--11-1111111111111111111111-1-111--11-111-1111111-------------111-121111--11-------1--1-11111---------------11111-1-1-11111---11--111--1-11-11111111111-11111111-11111111---111111111111111111-1111111-11---------11111112222222222-2222211222222222222111112221111111111111111111111111112222222222211111111111111111-1111111111111121-11112111--1111-212-111111111111111111-1112222211111111111111111111-1-11----1-1-1--1------11--1--------1--------1111111111-1- --------11----------------------------------------------1------------------------------------------------------------------------12-----------------------------------------------1--1-111----31-143571 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHc //