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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : comL
DDBJ      :comL         putative competence lipoprotein ComL
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  332/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.118.8
:282 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   43->126 3ee7D PDBj 8e-04 9.5 %
:HMM:SCOP  24->174 2fbnA1 a.118.8.1 * 8.1e-05 18.1 %
:HMM:PFM   8->83 PF07219 * HemY_N 0.00052 19.7 76/134  
:BLT:SWISS 19->255 Y1543_RHILO 2e-39 35.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20842.1 GT:GENE comL GT:PRODUCT putative competence lipoprotein ComL GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(19571..20419) GB:FROM 19571 GB:TO 20419 GB:DIRECTION - GB:GENE comL GB:PRODUCT putative competence lipoprotein ComL GB:PROTEIN_ID AAZ20842.1 GB:DB_XREF GI:71061839 GB:GENE:GENE comL LENGTH 282 SQ:AASEQ MLSKLKIILLLITFTFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSPWAAKSAIMAAYAYYTQYYYSDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKDLKSILDSKEQFETIIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALNRFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYKVFNKDYRDGVKELQKDKKKKIGLIKRFKGLFE GT:EXON 1|1-282:0| BL:SWS:NREP 1 BL:SWS:REP 19->255|Y1543_RHILO|2e-39|35.0|237/289| TM:NTM 1 TM:REGION 6->23| SEG 4->17|klkiilllitftfi| SEG 75->95|aaksaimaayayytqyyysda| SEG 259->280|gvkelqkdkkkkiglikrfkgl| RP:PDB:NREP 1 RP:PDB:REP 43->126|3ee7D|8e-04|9.5|84/112| HM:PFM:NREP 1 HM:PFM:REP 8->83|PF07219|0.00052|19.7|76/134|HemY_N| HM:SCP:REP 24->174|2fbnA1|8.1e-05|18.1|138/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 333 OP:NHOMOORG 333 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111111-1---1--11-11-111111111111111-111--1---------------111--11-1111--------------------------1111111-111-11111111111111111111--11111-------111-11---------------------------------11111--------------------------111111111111---111111111111-11-1111111111---111111111-11111111111111111111-11111111-------------1111111111111111111-------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 84 STR:RPRED 29.8 SQ:SECSTR ##########################################EEEEEccTTTcccccEEEEEEcccccEEEEEEEccccccEEEEEccccccEEEEEccEEEEEccTTccEEEEEEEcTTccHHHH############################################################################################################################################################ DISOP:02AL 1-2| PSIPRED cHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHcc //