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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : crtB
DDBJ      :crtB         Phytoene synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  115/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:283 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->237 2zcrA PDBj 6e-10 27.4 %
:RPS:PDB   76->222 2e8vA PDBj 6e-09 11.0 %
:RPS:SCOP  89->255 1ezfA  a.128.1.2 * 1e-18 17.8 %
:HMM:SCOP  4->283 1ezfA_ a.128.1.2 * 7.9e-76 38.8 %
:RPS:PFM   10->186 PF00494 * SQS_PSY 3e-15 30.9 %
:HMM:PFM   10->237 PF00494 * SQS_PSY 2.6e-45 29.0 224/267  
:BLT:SWISS 92->222 CRTB_PANAN 5e-20 40.8 %
:PROS 116->131|PS01044|SQUALEN_PHYTOEN_SYN_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20945.1 GT:GENE crtB GT:PRODUCT Phytoene synthase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 130930..131781 GB:FROM 130930 GB:TO 131781 GB:DIRECTION + GB:GENE crtB GB:PRODUCT Phytoene synthase GB:PROTEIN_ID AAZ20945.1 GB:DB_XREF GI:71061942 GB:GENE:GENE crtB LENGTH 283 SQ:AASEQ MSKNNYLSIYAKSFNWAGFFLPKNIYEKCSSLYDFCRTIDDIADDKNELNIKKKNLLIFKNNFINKNFDNLIIKNMWILMEENKISIKIVEDLFDGIESDLNEVVKFNKKKELLIYSYRVAGTVGLMMAKILGVQNKNSMKSAIDLGIAMQLTNISRDVIEDMNNNRFYINHDFETIKNTLSMADLFYESSFASIKEIPFRFRFAILVARRIYRKIGAKILQKENIYNYNRSGKIYVANLGKLYQTFLSILDLIKLIFINEKNHLRNKEHLLINEEIDLNERI GT:EXON 1|1-283:0| BL:SWS:NREP 1 BL:SWS:REP 92->222|CRTB_PANAN|5e-20|40.8|130/309| PROS 116->131|PS01044|SQUALEN_PHYTOEN_SYN_1|PDOC00802| SEG 44->75|ddknelnikkknllifknnfinknfdnliikn| BL:PDB:NREP 1 BL:PDB:REP 10->237|2zcrA|6e-10|27.4|223/281| RP:PDB:NREP 1 RP:PDB:REP 76->222|2e8vA|6e-09|11.0|146/292| RP:PFM:NREP 1 RP:PFM:REP 10->186|PF00494|3e-15|30.9|175/257|SQS_PSY| HM:PFM:NREP 1 HM:PFM:REP 10->237|PF00494|2.6e-45|29.0|224/267|SQS_PSY| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00494|IPR002060| GO:PFM GO:0016740|"GO:transferase activity"|PF00494|IPR002060| RP:SCP:NREP 1 RP:SCP:REP 89->255|1ezfA|1e-18|17.8|163/323|a.128.1.2| HM:SCP:REP 4->283|1ezfA_|7.9e-76|38.8|273/0|a.128.1.2|1/1|Terpenoid synthases| OP:NHOMO 163 OP:NHOMOORG 130 OP:PATTERN -------------------------------------------------------------------- --1--------------------------------------------------------------------------------------------------------------------------1111111111111111---11111-1111111--1-1111111111111111111111-1111--111--------------------1---------11---------------------------------------11-------111----------------------------------------------------------------------------------------------------1-----------21---11111--------------1----1-----------------1----1-1-11-----------------21-----------------------------11-----------------------------------------------------1-1-111111121111--11111-------------------------1-11----------------------------------------------------------------11-------1-----------------------------------------1-------------------------------------------------------------------------------------------------1----------------------1--------------------------------------------------------------------------1-- -----------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------1--1I111-13356-11------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 231 STR:RPRED 81.6 SQ:SECSTR #########HcHHHHHHHTTccHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHcTTccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcccccHHHHHHHHHHHTHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTc########################################### DISOP:02AL 1-3, 282-283| PSIPRED ccHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccHHHHHHHHHHHHHHHHccEEEEcccccccHHHHHccccccccccc //