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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ctaB
DDBJ      :ctaB         cytochrome c oxidase assembly factor
Swiss-Prot:COXX_PELUB   RecName: Full=Protoheme IX farnesyltransferase;         EC=2.5.1.-;AltName: Full=Heme O synthase;AltName: Full=Heme B farnesyltransferase;

Homologs  Archaea  35/68 : Bacteria  599/915 : Eukaryota  163/199 : Viruses  0/175   --->[See Alignment]
:288 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   40->240 PF01040 * UbiA 8e-09 29.1 %
:HMM:PFM   18->250 PF01040 * UbiA 2.8e-30 20.4 226/258  
:BLT:SWISS 1->271 COXX_PELUB e-155 99.6 %
:PROS 57->79|PS00943|UBIA
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20957.1 GT:GENE ctaB GT:PRODUCT cytochrome c oxidase assembly factor GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(140067..140933) GB:FROM 140067 GB:TO 140933 GB:DIRECTION - GB:GENE ctaB GB:PRODUCT cytochrome c oxidase assembly factor GB:PROTEIN_ID AAZ20957.1 GB:DB_XREF GI:71061954 GB:GENE:GENE ctaB LENGTH 288 SQ:AASEQ MFNFSELFKLMKPRVMSLVIFTCAVGLLMAPSTVSTKDAMIAILLVSIGAGAAGALNMWYESDLDALMTRTCLRPIPMGKVNKNQALIFGTSLSFFSVIALDYFANTISAVLLLFTILFYVFVYTIWLKRKTPQNIVIGGAAGALPPVIGWTIATNSLSLEPITFFLIIFFWTPSHFWALSLYKSDDYKKAKIPMLPLTNGIESTKINILVYSLLMLPMVILPYAIDFVGLVFLVPALMLTLYYNILCFELYKFKINKFNPKKAKTIFGYSILYLFLIFVIFLIDKIL GT:EXON 1|1-288:0| SW:ID COXX_PELUB SW:DE RecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-;AltName: Full=Heme O synthase;AltName: Full=Heme B farnesyltransferase; SW:GN Name=ctaB; OrderedLocusNames=SAR11_0133; SW:KW Cell inner membrane; Cell membrane; Complete proteome;Heme biosynthesis; Membrane; Transferase; Transmembrane. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->271|COXX_PELUB|e-155|99.6|271/303| GO:SWS:NREP 6 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0006783|"GO:heme biosynthetic process"|Heme biosynthesis| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| PROS 57->79|PS00943|UBIA|PDOC00727| TM:NTM 7 TM:REGION 25->47| TM:REGION 85->102| TM:REGION 108->128| TM:REGION 143->165| TM:REGION 196->218| TM:REGION 230->252| TM:REGION 265->287| SEG 272->287|ilylflifviflidki| RP:PFM:NREP 1 RP:PFM:REP 40->240|PF01040|8e-09|29.1|196/261|UbiA| HM:PFM:NREP 1 HM:PFM:REP 18->250|PF01040|2.8e-30|20.4|226/258|UbiA| GO:PFM:NREP 2 GO:PFM GO:0004659|"GO:prenyltransferase activity"|PF01040|IPR000537| GO:PFM GO:0016021|"GO:integral to membrane"|PF01040|IPR000537| OP:NHOMO 872 OP:NHOMOORG 797 OP:PATTERN 11---111111111111121211111111122-----------------------------2111-22 1211111111111111111-111111111111111111111111111111111111111111111121111------------1-----------------111111112--------------11----------11111---11111111111111111111111111111111111111111111---11211111111211111111111211111121111111112111111111111111111111--------------------------------------------------------------------------------------------------1---1--1--------------1-11111111111211122111111-111-111111-111111111211111111111111111111111111111111111111111121-111111111121111111111111-111111111-1111111111111111111111111111111111111111111111111112111121-------1111111-----11---11--1-1-111--11-111---------------------------221112111122111222121222221122121--11-111-11111111111111111111-1111111111111111111111111111111111111111111111-11-111111111111111111111111111111111---------------1111111---1122222222122221111-11111111-1--1-----221111111111111111111--111111----------------------------------------------11- 11--111-311-11111111111111111-11-1111------11111111111--1-11-111111111111111111111111111-12-11-1----121112-1-12111111-11-1111111-151-121111-1-112-11--11121111-121211111111111111114111-111221111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 288-289| PSIPRED cccHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHc //