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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ctaG
DDBJ      :ctaG         Cytochrome c oxidase assembly protein CtaG/Cox11
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  228/915 : Eukaryota  171/199 : Viruses  0/175   --->[See Alignment]
b.146.1
:178 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->168 1so9A PDBj 5e-26 41.0 %
:RPS:SCOP  47->168 1so9A  b.146.1.1 * 7e-24 41.0 %
:HMM:SCOP  45->174 1so9A_ b.146.1.1 * 2.6e-36 34.6 %
:RPS:PFM   26->170 PF04442 * CtaG_Cox11 3e-32 42.1 %
:HMM:PFM   25->169 PF04442 * CtaG_Cox11 2e-52 40.7 145/152  
:BLT:SWISS 3->171 COXZ_BRUSU 3e-43 47.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20955.1 GT:GENE ctaG GT:PRODUCT Cytochrome c oxidase assembly protein CtaG/Cox11 GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(139409..139945) GB:FROM 139409 GB:TO 139945 GB:DIRECTION - GB:GENE ctaG GB:PRODUCT Cytochrome c oxidase assembly protein CtaG/Cox11 GB:PROTEIN_ID AAZ20955.1 GB:DB_XREF GI:71061952 GB:GENE:GENE ctaG LENGTH 178 SQ:AASEQ MKNKTLTPILLAGIFFLMLGLSFAAVPLYDLFCRVTGFGGTTQISREAPDIILNQKVSVRFDTNVNKLPWNFKAKTNVMDVKIGQVNRIEFEVENYGNETTYGVASFNVSPSSFGKYYSKLGCFCFEKQALKAGEKATYIMTFYLDPEMVNDPNTKNIKDVTMSYTFFSSDYYNQSKL GT:EXON 1|1-178:0| BL:SWS:NREP 1 BL:SWS:REP 3->171|COXZ_BRUSU|3e-43|47.0|168/201| TM:NTM 1 TM:REGION 10->32| BL:PDB:NREP 1 BL:PDB:REP 47->168|1so9A|5e-26|41.0|122/131| RP:PFM:NREP 1 RP:PFM:REP 26->170|PF04442|3e-32|42.1|145/151|CtaG_Cox11| HM:PFM:NREP 1 HM:PFM:REP 25->169|PF04442|2e-52|40.7|145/152|CtaG_Cox11| GO:PFM:NREP 1 GO:PFM GO:0005507|"GO:copper ion binding"|PF04442|IPR007533| RP:SCP:NREP 1 RP:SCP:REP 47->168|1so9A|7e-24|41.0|122/131|b.146.1.1| HM:SCP:REP 45->174|1so9A_|2.6e-36|34.6|130/131|b.146.1.1|1/1|Ctag/Cox11| OP:NHOMO 434 OP:NHOMOORG 399 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----1111132111111--11-111111111111111111-111111111111111111111111111------------111-111111111111111111111111-111111111------111111111111111111111111111111111111111111111111-111--------111111--------------------------------------------------------------111111111111111111111111111---11-1--------------------------------------------------------------------------------------------1-----111111-----------------------------111111111111111--1-------------1-----111111111111111----11--------------------------------------------------------- 11--111-311-1111111-11111111111111111111--111111111111-111111111111111111111111111111111-11111111111111111-11-111112-1-1-11121-1-1A1-13111--2-112-111111-1-1211---1211-111211111111A1111111-21111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 122 STR:RPRED 68.5 SQ:SECSTR ##############################################ccccccccccEEEEEEEEEcTccEEEEccccEEEEcTTccccEEEEEEEcccccEEcccEEEEccccccTTcTTcccccccccEEcTTcEEEEEEcccccGGGGccTTTTTcccccEEEEEc########## DISOP:02AL 1-2, 174-178| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEccccccEEEEEEccEEEEEEccEEEEEEEEEccccccEEEEEEEEEcHHHHHHHHcEEEEEEccccEEccccEEEccEEEEEccccccccccccccEEEEEEEEEEEcccccccc //