[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : dcd
DDBJ      :dcd          Deoxycytidine triphosphate deaminase
Swiss-Prot:DCD_PELUB    RecName: Full=Deoxycytidine triphosphate deaminase;         Short=dCTP deaminase;         EC=3.5.4.13;

Homologs  Archaea  50/68 : Bacteria  395/915 : Eukaryota  2/199 : Viruses  2/175   --->[See Alignment]
b.85.4
:185 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->181 2qxxA PDBj 1e-16 30.6 %
:RPS:PDB   48->180 3ehwB PDBj 3e-28 16.5 %
:RPS:SCOP  4->185 1xs1A  b.85.4.1 * 3e-43 26.0 %
:HMM:SCOP  2->187 1xs1A_ b.85.4.1 * 3.6e-44 32.6 %
:HMM:PFM   73->181 PF00692 * dUTPase 6.6e-14 19.4 108/129  
:BLT:SWISS 1->185 DCD_PELUB e-104 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21294.1 GT:GENE dcd GT:PRODUCT Deoxycytidine triphosphate deaminase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 462838..463395 GB:FROM 462838 GB:TO 463395 GB:DIRECTION + GB:GENE dcd GB:PRODUCT Deoxycytidine triphosphate deaminase GB:PROTEIN_ID AAZ21294.1 GB:DB_XREF GI:71062291 GB:GENE:GENE dcd LENGTH 185 SQ:AASEQ MSVLSDKSIRKLAVEQSMISPFIDKQVRDGKISYGLSSFGYDARVGDEFKIFHNVNSSIVDPKEFSSDNFVTKKSSDYIIIPPNSFALGTTIEVFKIPRDIMCIVVGKSTYARTGIIVNVTPIESEFFGTVTLEFSNTTPLPAKIYANEGVAQFLFLKGDQSPETSYADRKGKYMGQTGVTLPKV GT:EXON 1|1-185:0| SW:ID DCD_PELUB SW:DE RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; SW:GN Name=dcd; OrderedLocusNames=SAR11_0472; SW:KW Complete proteome; Hydrolase; Nucleotide metabolism. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->185|DCD_PELUB|e-104|100.0|185/185| GO:SWS:NREP 2 GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0009117|"GO:nucleotide metabolic process"|Nucleotide metabolism| BL:PDB:NREP 1 BL:PDB:REP 3->181|2qxxA|1e-16|30.6|170/189| RP:PDB:NREP 1 RP:PDB:REP 48->180|3ehwB|3e-28|16.5|133/140| HM:PFM:NREP 1 HM:PFM:REP 73->181|PF00692|6.6e-14|19.4|108/129|dUTPase| RP:SCP:NREP 1 RP:SCP:REP 4->185|1xs1A|3e-43|26.0|173/193|b.85.4.1| HM:SCP:REP 2->187|1xs1A_|3.6e-44|32.6|178/0|b.85.4.1|1/1|dUTPase-like| OP:NHOMO 453 OP:NHOMOORG 449 OP:PATTERN --111111111111111111111-11111111111---1-1--11111-----1111-111-1111-- 11-11-1111111121111-1111111111111111111111111111-11111111111111-111111111111111-1--11111--------------------1-111111111111111-----------11111---111--1-1-11111111111111111-11111111111111-1111--------------------1-----------------------------------------------------------------------------------------------------------------------------------------1-------------1-------1--11--------------------------------------------------------------------------111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111121111111111111211111111111111111---------------------------------1111111111111111111-111111--1-111-1-----------------------11111-------------------------------------------------1-----------------1---------111111111111--111111111111111----11-1111111111111111111111111-111111111111111111111---------------11111111111111--------------------------------------------------------1-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1------------------------- ----------------1----1--------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 183 STR:RPRED 98.9 SQ:SECSTR ##EEEEEccccEEEccEEEcTTccccEEEEEEEcccccETccEEEEEccEEEEccTTccccccccTTccEEEEEccccEEEcTTEEEEEEccEEEEccTTEEEEEEccHHHHHHcEEEEccEEcTTcccccEEEEEEcccccEEEcTTcEEEEEEEEEccccccccccccTTccTTTTccEcccG DISOP:02AL 164-174| PSIPRED cccccHHHHHHHHHcccccccccccccccccHHccccccEEEEEEccEEEEEEcccccEEccccccccccEEEccccEEEEccccEEEEEEEEEEEcccccEEEEEEccccEEEEEEEEcEEEccccEEEEEEEEEEcccccEEEccccEEEEEEEEEccccccccccccccccccccccccccc //