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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : dctQ
DDBJ      :dctQ         Tripartite ATP-independent periplasmic
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:169 amino acids
:PSIPRED
:RPS:PFM   30->96 PF04290 * DctQ 8e-08 32.8 %
:HMM:PFM   30->162 PF04290 * DctQ 1.9e-29 25.8 132/133  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22096.1 GT:GENE dctQ GT:PRODUCT Tripartite ATP-independent periplasmic GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1227395..1227904) GB:FROM 1227395 GB:TO 1227904 GB:DIRECTION - GB:GENE dctQ GB:PRODUCT Tripartite ATP-independent periplasmic GB:PROTEIN_ID AAZ22096.1 GB:DB_XREF GI:71063093 GB:GENE:GENE dctQ LENGTH 169 SQ:AASEQ MPKIFSIYVNIIDNICVKVGRFVMYGVFFMMFLLILSFVTRNIINYPLMWIIEMAQFTLTAYYLLGGGYSMITDDHVRMDLFYGKLSAKGKAKMDVFTSIFLIFFLVVLLYGSISSLQYTLEYKQKLFTAWAPYLWPIKSLMLLGILLMLLQAFSMLIKDIAKIKGIKI GT:EXON 1|1-169:0| TM:NTM 4 TM:REGION 11->33| TM:REGION 48->69| TM:REGION 96->118| TM:REGION 138->160| SEG 100->110|iflifflvvll| SEG 141->151|lmllgillmll| SEG 158->168|ikdiakikgik| RP:PFM:NREP 1 RP:PFM:REP 30->96|PF04290|8e-08|32.8|67/133|DctQ| HM:PFM:NREP 1 HM:PFM:REP 30->162|PF04290|1.9e-29|25.8|132/133|DctQ| OP:NHOMO 20 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1-----------1--------------------11111211---------------------------------------------2--------------------------------------------------------1---------------------2---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------1--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //