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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : dfp
DDBJ      :dfp          phosphopantothenoylcysteine decarboxylase
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  821/915 : Eukaryota  172/199 : Viruses  1/175   --->[See Alignment]
c.34.1c.72.3
:401 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->181 1e20A PDBj 2e-25 35.3 %
:BLT:PDB   182->372 1u7zC PDBj 2e-23 35.4 %
:RPS:PDB   7->177 1e20A PDBj 6e-48 34.7 %
:RPS:PDB   186->239 3bm5B PDBj 3e-05 24.1 %
:RPS:SCOP  1->170 1p3y1  c.34.1.1 * 1e-52 23.4 %
:RPS:SCOP  191->399 1p9oA  c.72.3.1 * 2e-29 27.4 %
:HMM:SCOP  1->183 1p3y1_ c.34.1.1 * 2.2e-59 48.9 %
:HMM:SCOP  184->402 1u7zA_ c.72.3.1 * 8.1e-63 45.1 %
:RPS:PFM   9->124 PF02441 * Flavoprotein 2e-20 44.0 %
:RPS:PFM   191->383 PF04127 * DFP 2e-25 43.2 %
:HMM:PFM   190->368 PF04127 * DFP 1.3e-48 42.2 173/199  
:HMM:PFM   8->124 PF02441 * Flavoprotein 2.3e-34 45.2 115/122  
:BLT:SWISS 1->400 COABC_VIBF1 2e-80 41.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21226.1 GT:GENE dfp GT:PRODUCT phosphopantothenoylcysteine decarboxylase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(393737..394942) GB:FROM 393737 GB:TO 394942 GB:DIRECTION - GB:GENE dfp GB:PRODUCT phosphopantothenoylcysteine decarboxylase GB:PROTEIN_ID AAZ21226.1 GB:DB_XREF GI:71062223 GB:GENE:GENE dfp LENGTH 401 SQ:AASEQ MNNISERKILLIICGGISAYKSLELIRSLKKLGAKVKTILTKSAKEFVTPLSVASLSQEKVYDDLFNPENEAEMDHISLSRWADLIVVAPATANTISKLSTGSSDDLASTVILASDKDIFLTPAMNVRMWDHPSTKENLKKLRSFGYKIIGPEIGDMACGEFGEGKMTEPDNIVQEINLYFSELNKNYKLKALVTAGPTNEYIDPVRFITNKSSGKQGYALAKAFAKKGFQTTLISGPTNLEVGNNINLIKVETADEMFKAAQNNLPTDVAIFSAAVADFKVKEISNSKIKKQEKLNLELEKNIDILNYVSKHNSLRPKLVIGFAAETNNIEENAKKKLDEKNCDWIIANDVSNKAIGFDSSFNEVSIYYRDKNMDDERLTIKSKSEISDEIVDRVIKRLN GT:EXON 1|1-401:0| BL:SWS:NREP 1 BL:SWS:REP 1->400|COABC_VIBF1|2e-80|41.3|395/409| SEG 289->304|kikkqeklnlelekni| BL:PDB:NREP 2 BL:PDB:REP 8->181|1e20A|2e-25|35.3|173/185| BL:PDB:REP 182->372|1u7zC|2e-23|35.4|189/219| RP:PDB:NREP 2 RP:PDB:REP 7->177|1e20A|6e-48|34.7|170/185| RP:PDB:REP 186->239|3bm5B|3e-05|24.1|54/335| RP:PFM:NREP 2 RP:PFM:REP 9->124|PF02441|2e-20|44.0|116/122|Flavoprotein| RP:PFM:REP 191->383|PF04127|2e-25|43.2|185/195|DFP| HM:PFM:NREP 2 HM:PFM:REP 190->368|PF04127|1.3e-48|42.2|173/199|DFP| HM:PFM:REP 8->124|PF02441|2.3e-34|45.2|115/122|Flavoprotein| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF02441|IPR003382| RP:SCP:NREP 2 RP:SCP:REP 1->170|1p3y1|1e-52|23.4|167/171|c.34.1.1| RP:SCP:REP 191->399|1p9oA|2e-29|27.4|186/269|c.72.3.1| HM:SCP:REP 1->183|1p3y1_|2.2e-59|48.9|180/183|c.34.1.1|1/1|Homo-oligomeric flavin-containing Cys decarboxylases, HFCD| HM:SCP:REP 184->402|1u7zA_|8.1e-63|45.1|215/0|c.72.3.1|1/1|CoaB-like| OP:NHOMO 1148 OP:NHOMOORG 1059 OP:PATTERN 1111111111111111-11111111111111121111121221111111111111111111111--11 1111211111111111111-1111111111111111111111111111111111111111111111111111---1--111211111111111111---11111111111---------------111111111111111111111111111111111111111111111111111111111111111---11111111111111111121111111111111111111111111121222221112211111111111111111111111111111-1111122111121111111111111111111111111111-111111111111111111111111111-11111111111111111111111111112111111111111111111111111111111111-1111111111111111111111111111-1111111111111111111111111122222122---------------------11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111------11111111111111111-1111111111111111111111112111111--1----111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222211111111-------------------1----1---1111111111112 1-11111-311--11-211111111111111-1111111111111121111111-1111111222222123222211-1122222211--212121112111111--1-12211-111--111-12-11161-111-11111114-11--1-11111121111-111112-111111116111-121331211111111 ----------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------- STR:NPRED 372 STR:RPRED 92.8 SQ:SECSTR HTTccccEEEEEEcccGGGGGHHHHHHHHHTTTcEEEEEEcTTHHHHccGGGccTTcEEEcTTHHHHHccccccHHHHHHHHccEEEEEEEcHHHHHHHHTTccccHHHHHHHTccTTcEEEEcccHHHHHcHHHHHHHHHHHHHTcEEccccTTcTTcccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHTcccTTcEEEEEcccHHHHHHHHHHHHHTccEEEEEETTcccccTTcEEEEcccHHHHHHHHHHTTGGGccEEEEccccccEEEcccccccccccccccEEEcccHHHHHHTccccccTEEEEEEEEcccHHHHHHHHHHHHTccEEEEEEcccTTccccccEEEEEEEETT############################# DISOP:02AL 1-5, 286-296| PSIPRED cccccccEEEEEEEcHHHHHHHHHHHHHHHHcccEEEEEEcHHHHHHccHHHHHHHHcccHHHHHHccccccccccccccccccEEEEEcccHHHHHHHHHHHcccHHHHHHHHccccEEEEEcccHHHHccHHHHHHHHHHHHcccEEEcccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEccccccccccEEEEccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccEEEEEEcHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccEEEEEEcHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEEEccccccEEEEccccHHHHHHHHHHHHHHHcc //