[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : dhaS
DDBJ      :dhaS         betaine-aldehyde dehydrogenase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  801/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.82.1
:493 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->482 3fg0E PDBj e-101 39.0 %
:RPS:PDB   2->482 3ek1B PDBj e-130 34.0 %
:RPS:SCOP  1->490 1a4sA  c.82.1.1 * e-122 32.8 %
:HMM:SCOP  4->480 1uzbA_ c.82.1.1 * 2.2e-156 41.6 %
:RPS:PFM   33->464 PF00171 * Aldedh 5e-94 40.9 %
:HMM:PFM   15->476 PF00171 * Aldedh 8.3e-162 45.3 459/462  
:BLT:SWISS 9->483 ALDH_CLAHE e-103 41.3 %
:PROS 279->290|PS00070|ALDEHYDE_DEHYDR_CYS
:PROS 251->258|PS00687|ALDEHYDE_DEHYDR_GLU

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22147.1 GT:GENE dhaS GT:PRODUCT betaine-aldehyde dehydrogenase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1279864..1281345 GB:FROM 1279864 GB:TO 1281345 GB:DIRECTION + GB:GENE dhaS GB:PRODUCT betaine-aldehyde dehydrogenase GB:PROTEIN_ID AAZ22147.1 GB:DB_XREF GI:71063144 GB:GENE:GENE dhaS LENGTH 493 SQ:AASEQ MTKIQNFKMYINGLWVNSESGKTIETVNPENNEVWATVPEANEKDVDKAVKAAQNAFEKSWSNLHPRERAKYLRSLADQLRQNAEHLGTIETIDTGKIFRETKTQANYIAEYYDYFAGLADKVEGTVVPIDKPDMQVTTTRIPIGVVAAIIPWNSQMLLTAVKLAPALAMGNTVVIKASELAPVTLLEFAKLVEKSGIPKGVVNIITGLGEPCGKALTTHDLVERIAFTGGPETAKHIVKNSAENLSQVSLELGGKSPVVVFDDAEQENALNGITAGIFGASGQSCIAGSRLYIQSKIYDDFLNKLIAKAEKIKLGAPMDNETQMGPLNSYKQLENIEKNIKATIEQGGKIRCGGKRSNISSKAYYFPATIIECENHNLPTAENELFGPVLSVMKFETEEDVIKLMNDNKYGLSSGVYTSNFGRGLRVSKAIRAGITFVNTYRLISPMAPFGGIKDSGYGKEAGIESIKEYTRIKTTWLNSSDKPMTDPFTMG GT:EXON 1|1-493:0| BL:SWS:NREP 1 BL:SWS:REP 9->483|ALDH_CLAHE|e-103|41.3|472/496| PROS 279->290|PS00070|ALDEHYDE_DEHYDR_CYS|PDOC00068| PROS 251->258|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| BL:PDB:NREP 1 BL:PDB:REP 8->482|3fg0E|e-101|39.0|474/501| RP:PDB:NREP 1 RP:PDB:REP 2->482|3ek1B|e-130|34.0|476/483| RP:PFM:NREP 1 RP:PFM:REP 33->464|PF00171|5e-94|40.9|428/440|Aldedh| HM:PFM:NREP 1 HM:PFM:REP 15->476|PF00171|8.3e-162|45.3|459/462|Aldedh| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590| RP:SCP:NREP 1 RP:SCP:REP 1->490|1a4sA|e-122|32.8|485/503|c.82.1.1| HM:SCP:REP 4->480|1uzbA_|2.2e-156|41.6|471/516|c.82.1.1|1/1|ALDH-like| OP:NHOMO 10155 OP:NHOMOORG 1047 OP:PATTERN 221-1-4754454653-312111-A4432-521-11111111211222124431-1--1-13351--1 6994M947AAE547KQMAB-AP22JbAAAAAFSRXUNV**8M6U68781744VJPDAA--DEQ3CFONLLA----111-122H111111-12-211---62637484766--------------12212221221266687---64455334313111113122324555411111111111187845-1-C89999998AAAA99887EDAA6B9AB9HFDF86222221D54555555555555558667711112311111122222111122---2222111-221111111111122212222222221--111---2-11282223223322-211-2223123131---2211---1--1---1138-6IEEA11111B6GBK5469A8A7FGHJFDHCHGH-45D43J6ANOB-NJJMLLWRNYQQEAAC5BHQCAAC8JIEDEEEEEEADC6476811111111----1111-1111-11-11118APbB2BOKDEdYaaYbQKKKGbacePPNMBNuUvMbUL14GCFD9CB9HDNDLP333-112A62444444132AC664413331332223-3333435443333AC15211322211211111111112-11143981894L7DB9AAAAA9AC888997AB9AD-1-5421------A967587B998B878BC-9CAC988C7B98ABBABB9IJI998A4A98998999A77A797J773667621467688758888--1633122888717DLW222112-----2223NMOHK8H7C9H1KKKKLPOUHTTPOCKHJ3221132222433A566668B88B8999997555------11441111--------2-2----1---1-12-111-13--111111112-2-2-331 ----CCA-A54-9C8IJLKQNQKSTRSEECCCCEEDEFEEEEEBDDEDKUUg*pNMGCDDDCD9C6AA4B88D9A995A98BA9AD57-KUEJCGEECD9B9GFCF-9NBZOiJNOPDEEAFLFPQBYDv*Q-SPXCEE9REFPEAGEEDIAAbFFDGNKdWCPFEATBEHAKPC5764*66579LGdXLJc87UGVMH ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 493 STR:RPRED 100.0 SQ:SECSTR HGGGccccEEETTEEEccTTccEEEEEcTTTccEEEEEEcccHHHHHHHHHHHHHHHcHHHHTccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHTTcccEEEccccTTEEEEEEEEEccEEEEEcccccTTHHHHHHHHHHHHHTcEEEEEccTTcHHHHHHHHHHHHHTTccTTTEEEccccHHHHHHHHHHcTTEEEEEEEccHHHHHHHHHHHGGGTcEEEEEccccEEEEEcTTccHHHHHHHHHHHHHGGGGccTTcEEEEEEEHHHHHHHHHHHHHHHHTcccccTTcTTccccccccHHHHHHHHHHHHHHHHTTcEEEEcccEEEccEETTEEccEEEEEEcTTcGGGTccccccEEEEEEEccHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccccEEEEcccccccccccccccGGGEEccccHHHHGGGGEEEEEEEEEccccccTTccHHc DISOP:02AL 1-2| PSIPRED cccccccccEEccEEEccccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccEEEEEEEcccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHccccEEEEEEcccccEEEcccccHHHHHHHHHHHHHHccccEEEcccEEEEEccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccccccEEccEEEccccccccEEEEcccccEEEEEEcccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccHHHHHHHHHHHHEEEEEEEccccccccccccc //