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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : dsbB
DDBJ      :dsbB         Disulfide bond formation protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.29.15
:166 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  17->49 2hi7B1  a.29.15.1 * 7e-07 42.4 %
:RPS:PFM   17->49 PF02600 * DsbB 7e-04 42.4 %
:HMM:PFM   10->158 PF02600 * DsbB 3.3e-34 27.5 149/156  
:BLT:SWISS 1->139 Y370_RICPR 4e-10 44.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21242.1 GT:GENE dsbB GT:PRODUCT Disulfide bond formation protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(407365..407865) GB:FROM 407365 GB:TO 407865 GB:DIRECTION - GB:GENE dsbB GB:PRODUCT Disulfide bond formation protein GB:NOTE DsbB GB:PROTEIN_ID AAZ21242.1 GB:DB_XREF GI:71062239 GB:GENE:GENE dsbB LENGTH 166 SQ:AASEQ MQLNNTNMIKRKTTLHLILLFSIFALLTAYFIEHILGHQPCNLCLIERIPYVVSIVIILLFIFIQKFERFFLIILSITFIIAFSISFYHFGIEQGFIKESLVCDLNSNNADLTKEALLNQLKEVTVSCKDATFKILGLSLATINIFISLIITTITIKLFLTYEKNK GT:EXON 1|1-166:0| BL:SWS:NREP 1 BL:SWS:REP 1->139|Y370_RICPR|4e-10|44.1|136/172| TM:NTM 4 TM:REGION 13->35| TM:REGION 43->65| TM:REGION 69->90| TM:REGION 137->159| SEG 52->64|vvsiviillfifi| SEG 70->87|ffliilsitfiiafsisf| SEG 140->161|latinifisliittitiklflt| RP:PFM:NREP 1 RP:PFM:REP 17->49|PF02600|7e-04|42.4|33/158|DsbB| HM:PFM:NREP 1 HM:PFM:REP 10->158|PF02600|3.3e-34|27.5|149/156|DsbB| GO:PFM:NREP 2 GO:PFM GO:0015035|"GO:protein disulfide oxidoreductase activity"|PF02600|IPR003752| GO:PFM GO:0016020|"GO:membrane"|PF02600|IPR003752| RP:SCP:NREP 1 RP:SCP:REP 17->49|2hi7B1|7e-07|42.4|33/134|a.29.15.1| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 111-112, 164-166| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccc //