[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : dut
DDBJ      :dut          Deoxyuridine 5'-triphosphate nucleotidohydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  647/915 : Eukaryota  170/199 : Viruses  13/175   --->[See Alignment]
b.85.4
:117 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->117 2hquA PDBj 1e-21 48.1 %
:RPS:PDB   6->117 3ehwA PDBj 1e-29 46.4 %
:RPS:SCOP  2->102 1dudA  b.85.4.1 * 1e-25 36.6 %
:HMM:SCOP  1->118 1rnjA_ b.85.4.1 * 6.4e-42 53.4 %
:RPS:PFM   6->116 PF00692 * dUTPase 2e-29 57.8 %
:HMM:PFM   9->116 PF00692 * dUTPase 5.1e-31 51.4 105/129  
:BLT:SWISS 5->117 DUT_RHOP2 2e-35 57.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21225.1 GT:GENE dut GT:PRODUCT Deoxyuridine 5'-triphosphate nucleotidohydrolase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(393293..393646) GB:FROM 393293 GB:TO 393646 GB:DIRECTION - GB:GENE dut GB:PRODUCT Deoxyuridine 5'-triphosphate nucleotidohydrolase GB:PROTEIN_ID AAZ21225.1 GB:DB_XREF GI:71062222 GB:GENE:GENE dut LENGTH 117 SQ:AASEQ MAFIEEPIRIAPNSSYLVPTGLSMAFSEDYEVQIRPRSGLAAKKSITVLNTPGTIDSDYRGEIKVILFNHGKEDFLINNKDRIAQMVLMPVIKMEFEETDNLPDTLRGDGGFGSTGK GT:EXON 1|1-117:0| BL:SWS:NREP 1 BL:SWS:REP 5->117|DUT_RHOP2|2e-35|57.5|113/152| BL:PDB:NREP 1 BL:PDB:REP 10->117|2hquA|1e-21|48.1|106/138| RP:PDB:NREP 1 RP:PDB:REP 6->117|3ehwA|1e-29|46.4|110/141| RP:PFM:NREP 1 RP:PFM:REP 6->116|PF00692|2e-29|57.8|109/128|dUTPase| HM:PFM:NREP 1 HM:PFM:REP 9->116|PF00692|5.1e-31|51.4|105/129|dUTPase| GO:PFM:NREP 2 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00692|IPR008180| GO:PFM GO:0046080|"GO:dUTP metabolic process"|PF00692|IPR008180| RP:SCP:NREP 1 RP:SCP:REP 2->102|1dudA|1e-25|36.6|101/136|b.85.4.1| HM:SCP:REP 1->118|1rnjA_|6.4e-42|53.4|118/0|b.85.4.1|1/1|dUTPase-like| OP:NHOMO 958 OP:NHOMOORG 830 OP:PATTERN -------------------------------------------------------------------- -111131111111111111-1111111111111111111111111111111112111111111111-111111111111111111---111111111--11111111-1111111111111111111111111111----------111--1-----------1--1---1-----------------1111--11111---1-11---1-----------1---------11------------------1--------11-1------11-1--343--------------------------------------------11-21111111111111111---11112-1111113122111-111111----111111112111111111111111111111111---------11111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111112111111111112111111111111111111111111111111111-1111111111111111111111111111------------111111111-11--11111-1--1--111111111111111111111-1111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111-111111111111111111111111111--------------11111111111111--11111111--------111-11---------------------------------1- 1---121-1---11111--11111111-1111111-11111111-1-1111111-111111111111111111111111111111111-x11111222221-111111-121211-2111111122111473-21311--1-11-1-1--11-1121133421111-212311211111811111112411111-1111 -------------------1----------------1---------------------------------------------111-------------------------------1---1-------------111-----------------------1----------11-- STR:NPRED 116 STR:RPRED 99.1 SQ:SECSTR #ccccccEEEcTTEEEEEEccEEEEccTTEEEEEEccHHHHHHHcEEETTEccEEcTTcccccEEEEEEcccccEEEcTTcEEEEEEEEEcccccccccccccccccTTccTTTTcc DISOP:02AL 101-110, 113-117| PSIPRED cccccccEEEccccEEEEEccEEEEccccEEEEEEcccccccccccEEccccEEEcccccccEEEEEEEcccccEEEccccEEEEEEEEEEcEEEEEEccccccccccccccccccc //