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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : fabZ
DDBJ      :fabZ         (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  777/915 : Eukaryota  23/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:146 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->146 2gllC PDBj 8e-26 37.3 %
:RPS:PDB   2->145 3b7jC PDBj 9e-25 36.8 %
:RPS:SCOP  3->141 1u1zA  d.38.1.6 * 2e-32 36.8 %
:HMM:SCOP  5->147 1mkaA_ d.38.1.2 * 5.7e-36 42.3 %
:RPS:PFM   11->135 PF07977 * FabA 9e-23 40.0 %
:HMM:PFM   11->136 PF07977 * FabA 1.1e-33 37.3 126/138  
:BLT:SWISS 2->145 FABZ_MYXXD 5e-32 47.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21728.1 GT:GENE fabZ GT:PRODUCT (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 880790..881230 GB:FROM 880790 GB:TO 881230 GB:DIRECTION + GB:GENE fabZ GB:PRODUCT (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase GB:PROTEIN_ID AAZ21728.1 GB:DB_XREF GI:71062725 GB:GENE:GENE fabZ LENGTH 146 SQ:AASEQ MLDKKQIANLLPHREPMLLIDELHDIKKLSSATAIVYVKKDSFFVQGHFPNNPVMPGVLIVEAFGQAAAALTAHGLDKETYDNKLVFLMGIEKARFRNPVIPDCKLELKIQAIRTHGRVWKYKGDAFVDGKKMADAQWSATIVDKK GT:EXON 1|1-146:0| BL:SWS:NREP 1 BL:SWS:REP 2->145|FABZ_MYXXD|5e-32|47.6|143/153| BL:PDB:NREP 1 BL:PDB:REP 5->146|2gllC|8e-26|37.3|142/151| RP:PDB:NREP 1 RP:PDB:REP 2->145|3b7jC|9e-25|36.8|144/150| RP:PFM:NREP 1 RP:PFM:REP 11->135|PF07977|9e-23|40.0|125/127|FabA| HM:PFM:NREP 1 HM:PFM:REP 11->136|PF07977|1.1e-33|37.3|126/138|FabA| RP:SCP:NREP 1 RP:SCP:REP 3->141|1u1zA|2e-32|36.8|136/142|d.38.1.6| HM:SCP:REP 5->147|1mkaA_|5.7e-36|42.3|137/0|d.38.1.2|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 844 OP:NHOMOORG 800 OP:PATTERN -------------------------------------------------------------------- 1111------------------------------------------------1------------1-------------111111111111111111---12111121-11111111111111111111111111111111---11111111111111111111111111111111111111111111111111111111111111111111111111111211111111112111111111111111111112-121122-1-1122111212122222221111111111111111111111111111111111111111111111111111111111111111111--1211111111-11111111-11211111111111111111111111111111111111-11111111111111111111111111--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111-1111112111111111111111111111111-1-121111111111111211112111121-11111111111111111111111111111111111111111111111111111111111-1111111111-11111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--------------1-1-------------------------1111111111121 11------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------2----1111A111113212-2111----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 146 STR:RPRED 100.0 SQ:SECSTR cccHHHHHHHccccTTcccccEEEEEETTTEEEEEEEcccccGGGGTccTTcccccHHHHHHHHHHHHHHHHHHcccHHHHTTEEEEEEEEEEEEEcccccTTcEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEEEcc DISOP:02AL 146-147| PSIPRED cccHHHHHHHccccccEEEEEEEEEEEcccEEEEEEEccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccEEEccccccccEEEEEEEEEEEEccEEEEEEEEEEccEEEEEEEEEEEEEEcc //