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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : folB
DDBJ      :folB         dihydroneopterin aldolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  74/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.96.1
:141 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->136 1b9lA PDBj 1e-09 27.4 %
:RPS:PDB   23->136 1dhnA PDBj 2e-16 22.8 %
:RPS:SCOP  23->136 1nbuA  d.96.1.3 * 1e-18 17.5 %
:HMM:SCOP  21->136 1nbuA_ d.96.1.3 * 3.7e-26 28.4 %
:RPS:PFM   24->132 PF02152 * FolB 1e-10 31.2 %
:HMM:PFM   24->133 PF02152 * FolB 5.6e-28 28.2 110/113  
:BLT:SWISS 23->134 FOLB_HAEIN 1e-11 25.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20907.1 GT:GENE folB GT:PRODUCT dihydroneopterin aldolase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 98097..98522 GB:FROM 98097 GB:TO 98522 GB:DIRECTION + GB:GENE folB GB:PRODUCT dihydroneopterin aldolase GB:PROTEIN_ID AAZ20907.1 GB:DB_XREF GI:71061904 GB:GENE:GENE folB LENGTH 141 SQ:AASEQ MKKTNLNIIKIDKNKSLFNYEKKILIKELTLDLKLGYYDFEKEKTQKVKFSLEIDYEDRKPTNDKDIKSIVNYGQVVKLITKLAKNKHYNFLETLAEDVFDVLFKDKRIGKIMLQIEKLEIIKECASVGIQITKKRSHEEL GT:EXON 1|1-141:0| BL:SWS:NREP 1 BL:SWS:REP 23->134|FOLB_HAEIN|1e-11|25.0|112/118| BL:PDB:NREP 1 BL:PDB:REP 24->136|1b9lA|1e-09|27.4|113/119| RP:PDB:NREP 1 RP:PDB:REP 23->136|1dhnA|2e-16|22.8|114/121| RP:PFM:NREP 1 RP:PFM:REP 24->132|PF02152|1e-10|31.2|109/112|FolB| HM:PFM:NREP 1 HM:PFM:REP 24->133|PF02152|5.6e-28|28.2|110/113|FolB| GO:PFM:NREP 2 GO:PFM GO:0004150|"GO:dihydroneopterin aldolase activity"|PF02152|IPR006157| GO:PFM GO:0006760|"GO:folic acid and derivative metabolic process"|PF02152|IPR006157| RP:SCP:NREP 1 RP:SCP:REP 23->136|1nbuA|1e-18|17.5|114/118|d.96.1.3| HM:SCP:REP 21->136|1nbuA_|3.7e-26|28.4|116/118|d.96.1.3|1/1|Tetrahydrobiopterin biosynthesis enzymes-like| OP:NHOMO 74 OP:NHOMOORG 74 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------11111111111-1111-----------------------------1----111111------------------------------11-------------------1---------1--1-------------------------------------------------------1----11------1-1---------11--1-----------------------1------------------------------------111------------------------1-------------1---------------1-111111111111111--------------------------------------1--------------111111111111111---------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 83.0 SQ:SECSTR #####################EEEEEEEEEEEEcccccHHHHHHcEEEEEEEEEEEccHHHHHHccGGGcccHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHTTEEEEEEEEEEcccccccccEEEEEEEEcEc### DISOP:02AL 1-3, 138-141| PSIPRED ccccccEEEEEEccccccccccEEEEEEEEEEEEEcccHHHHHcccEEEEEEEEEEccccccccccHHHEEcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccEEEEEEEEcccccc //