[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : folC
DDBJ      :folC         FolC bifunctional protein (Folylpolyglutamate synthase/Dihydrofolate synthase)
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  839/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
c.59.1c.72.2
:422 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->418 1o5zA PDBj 1e-34 29.8 %
:RPS:PDB   6->420 2am1A PDBj 2e-33 16.4 %
:RPS:SCOP  8->286 1o5zA2  c.72.2.2 * 3e-47 24.4 %
:RPS:SCOP  290->420 1e8cA2  c.59.1.1 * 3e-14 16.1 %
:HMM:SCOP  1->288 1o5zA2 c.72.2.2 * 5.2e-68 34.8 %
:HMM:SCOP  297->422 1o5zA1 c.59.1.2 * 3.3e-20 30.3 %
:HMM:PFM   44->264 PF08245 * Mur_ligase_M 3.1e-11 27.6 170/188  
:HMM:PFM   304->347 PF02875 * Mur_ligase_C 0.00056 13.6 44/91  
:BLT:SWISS 10->417 FOLC_HAEIN 1e-37 31.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21307.1 GT:GENE folC GT:PRODUCT FolC bifunctional protein (Folylpolyglutamate synthase/Dihydrofolate synthase) GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(474189..475457) GB:FROM 474189 GB:TO 475457 GB:DIRECTION - GB:GENE folC GB:PRODUCT FolC bifunctional protein (Folylpolyglutamate synthase/Dihydrofolate synthase) GB:PROTEIN_ID AAZ21307.1 GB:DB_XREF GI:71062304 GB:GENE:GENE folC LENGTH 422 SQ:AASEQ MKLQKIVERLQKLHPKEIDLSLDRTKNLLEKLGNPQDQINCISIVGTNGKFSTIQALYAILKEADYKCNIYTSPHIQKINERFVFNNKPLTDDELANLFSEVEEANNQTQITFFEILTVAYFHYAKKYPENINLIESGLFHRFDATNILKKNLASIVTAIGLDHLDWLPKEEQTVEKIIFEKTSTLLNSKIVVAKQSSNEISKSIENTIKDNTSKKIIFNKNYNFTLKENDFFYFEDEFGALKLPKPNLPGEFQLENVSTAIATVRQLTDYKITDEHIKSGITKIESIARLQELKSGKLKDLTSNNLLFVDGSHNPLGAKVLNEYLQSLNCNKHIILGMMANKDHNEYMSYFKDIKSLTTIDIPNQPNAIKGSELKEKIKNFENINYKNSIEEAISSIDLQENDIILITGSLYLAGEVLNLN GT:EXON 1|1-422:0| BL:SWS:NREP 1 BL:SWS:REP 10->417|FOLC_HAEIN|1e-37|31.4|392/437| BL:PDB:NREP 1 BL:PDB:REP 7->418|1o5zA|1e-34|29.8|383/421| RP:PDB:NREP 1 RP:PDB:REP 6->420|2am1A|2e-33|16.4|359/442| HM:PFM:NREP 2 HM:PFM:REP 44->264|PF08245|3.1e-11|27.6|170/188|Mur_ligase_M| HM:PFM:REP 304->347|PF02875|0.00056|13.6|44/91|Mur_ligase_C| RP:SCP:NREP 2 RP:SCP:REP 8->286|1o5zA2|3e-47|24.4|266/284|c.72.2.2| RP:SCP:REP 290->420|1e8cA2|3e-14|16.1|124/160|c.59.1.1| HM:SCP:REP 1->288|1o5zA2|5.2e-68|34.8|282/296|c.72.2.2|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 297->422|1o5zA1|3.3e-20|30.3|122/137|c.59.1.2|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 1259 OP:NHOMOORG 1015 OP:PATTERN ------------------------21111111-----------------------------111---- 111-111111111111111-11111-11111111111111111111111111111111111111111111111111111111-1111111111111---11111111111--------------1111111111111111111112111122111111111111111111111111111111122-1111111111111111111111111111111111121111111111111111111111111111111111211221212222112113211111112111222222222222222222222222222222222222111211111111111111111111111111111111111111111111212111111111111111111111121211111111111-211111111111211111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111-1111111111111121111111111111111111111111111111-1111-111-111-11111111111111111111111111111111111111-1111111111111111111111111111111111111-1111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111--------111111111111111111111111111111111----11--------111--1-1---1--------1-------1211111111121 11--111-311-222222123433432334333312232333212133221-3-11122321222222222222223-2222222222-13222232222222223---12111-12-1-11112--3-892--11-1--1--2--11111--11--122321211122113311---1A312223115155112122- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 418 STR:RPRED 99.1 SQ:SECSTR ###HHEEccccccccEEEcccHHHHHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHTTTcccccEEcEEEccTTcccTTHHHHHHHTcTTccEEEEEHTTcccccccccccHHHHHHHHHHHHHTTccEEccccTTHHHHHHHHHcccEEEEEccccccccTTccTccTcHHHHHHHHGGGTTcTTcEEEEEccGGGGGGcccccEEEEEcTTccccEEEEEEcccccEEEEETTcccEEEEcEcccHHHHHHHHHHHHHHHHTHTTTccHHHHHHHGGGccccccccEEccTTTEEEEcTcEEEEEcccccHHHHHHHHHHTTcccccEEEEcTTHHHHHHHGGGccTTccEEEEEEcTTHHHHHHHHHccTcEEEEEccccccTHHHHHHHHHccTTEEEEEEccccHHHHHHHH# PSIPRED ccHHHHHHHHHHcccccccccHHHHHHHHHHccccHHccEEEEEEccccHHHHHHHHHHHHHHccccEEEcccccEEEcccEEEEccEEccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHcccccEEEEccccHHHHHHHccccccHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHcccEEEEcccEEEEEEccEEEEEEccccEEcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccEEEEEccccEEcccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHccccEEEEccccccccccHHHHHHHHHccccccccccHHHHHHHHHcccccEEEEEccHHHHHHHHHcc //