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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : frnE
DDBJ      :frnE         Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  226/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:205 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->191 3gl5A PDBj 1e-13 24.3 %
:RPS:PDB   64->201 1bedA PDBj 1e-07 8.7 %
:RPS:SCOP  1->185 1r4wA  c.47.1.13 * 8e-24 11.9 %
:HMM:SCOP  1->204 1r4wA_ c.47.1.13 * 2.3e-31 24.1 %
:RPS:PFM   2->200 PF01323 * DSBA 8e-14 29.9 %
:HMM:PFM   2->200 PF01323 * DSBA 7.7e-28 16.9 189/193  
:BLT:SWISS 3->200 YWBO_BACSU 3e-15 26.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21116.1 GT:GENE frnE GT:PRODUCT Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 294521..295138 GB:FROM 294521 GB:TO 295138 GB:DIRECTION + GB:GENE frnE GB:PRODUCT Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis GB:PROTEIN_ID AAZ21116.1 GB:DB_XREF GI:71062113 GB:GENE:GENE frnE LENGTH 205 SQ:AASEQ MKIKVFADTICGWCFIGQTRLNKALKNFPETKFEIEHVPFQLNTDMPKEGIERNKYLEIKFGGKEFAQPMYDRMTEEANKENLNFNLDKIKKTPNTVFSHLLIKLAEQSNVHNEIKEKIYQSYFIEGLDIGDKEILINIGKEFNINGDTINDFFNLKNIEEINSYILVAREKEINGVPFFEIGTDFISGAQSSANLESVIKSNLS GT:EXON 1|1-205:0| BL:SWS:NREP 1 BL:SWS:REP 3->200|YWBO_BACSU|3e-15|26.7|187/200| BL:PDB:NREP 1 BL:PDB:REP 2->191|3gl5A|1e-13|24.3|189/231| RP:PDB:NREP 1 RP:PDB:REP 64->201|1bedA|1e-07|8.7|138/181| RP:PFM:NREP 1 RP:PFM:REP 2->200|PF01323|8e-14|29.9|177/178|DSBA| HM:PFM:NREP 1 HM:PFM:REP 2->200|PF01323|7.7e-28|16.9|189/193|DSBA| GO:PFM:NREP 2 GO:PFM GO:0015035|"GO:protein disulfide oxidoreductase activity"|PF01323|IPR001853| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF01323|IPR001853| RP:SCP:NREP 1 RP:SCP:REP 1->185|1r4wA|8e-24|11.9|176/221|c.47.1.13| HM:SCP:REP 1->204|1r4wA_|2.3e-31|24.1|199/0|c.47.1.13|1/1|Thioredoxin-like| OP:NHOMO 324 OP:NHOMOORG 283 OP:PATTERN -------------------------------------------------------------------- -------1111--------------------------111-1-111---11-111--1--111-1--11-1----------1-----------------1-1-1-111-1-----------------------------------------------------------1-------------111-------1111112121222122--11112212112111------13---------------------1------1-----------1----------------------------------------------------111111111-1-1------------1---------------------1--211------11111--11111111111111111---1--1--111-122221111111--1111111111122--------111-1111-----------------------------11111------123122-------21-11---4111112----111111-11-1------1-------------111-----------------------------1--------------------------------1----111------2--------------------------------------------------------------------------------------1--------------------------------------2---2-1---------11111-1121--------12------111-------------111111--1--11--1--11111-1----11--11----------1-------------------------------------- ------------11121111---121-------2121111111---11121121--1-1111----------------------------111----11-----11---1------------------------------------------------------1---------1-11-----11111111111----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 200 STR:RPRED 97.6 SQ:SECSTR #EEEEEEcTTcHHHHHHHHHHHHHHHHHccccccTTTEEcccccTTcccEEEEEcTTcHHHHHHHHHHHHHHHHHTccTTcEEEEEEcccccGGGHHHHHHHHHHHHHTTcHHHHHHHHHHHHTTcccccccHHHHHHHHHTTTccHHHHHHHHTcHHHHHHHHHHHHHHHHTcccccEEEETEEcGGGcccHHHHHHHHH#### DISOP:02AL 204-206| PSIPRED cEEEEEEccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHcccccccEEEEccEEEcccccHHHHHHHHHHHHc //