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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : fusA
DDBJ      :fusA         translation elongation factor EF-G
Swiss-Prot:EFG_PELUB    RecName: Full=Elongation factor G;         Short=EF-G;

Homologs  Archaea  68/68 : Bacteria  912/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
b.43.3c.37.1d.14.1d.58.11
:692 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->688 2bm0A PDBj 0.0 58.8 %
:RPS:PDB   9->689 2dy1A PDBj e-145 32.3 %
:RPS:SCOP  7->281 1darA2  c.37.1.8 * 2e-91 61.0 %
:RPS:SCOP  260->401 1n0uA1  b.43.3.1 * 7e-21 18.7 %
:RPS:SCOP  404->481 1fnmA4  d.58.11.1 * 2e-27 74.4 %
:RPS:SCOP  475->593 1darA3  d.14.1.1 * 1e-29 51.3 %
:RPS:SCOP  600->688 1darA4  d.58.11.1 * 3e-31 66.3 %
:HMM:SCOP  5->281 2bv3A2 c.37.1.8 * 3.1e-109 52.5 %
:HMM:SCOP  264->403 2bv3A1 b.43.3.1 * 5.1e-38 45.5 %
:HMM:SCOP  403->480 1wdtA5 d.58.11.1 * 1.2e-28 53.2 %
:HMM:SCOP  478->597 2bv3A3 d.14.1.1 * 1.2e-39 54.2 %
:HMM:SCOP  602->691 1n0uA5 d.58.11.1 * 1.3e-30 46.7 %
:RPS:PFM   11->140 PF00009 * GTP_EFTU 4e-30 53.5 %
:RPS:PFM   248->341 PF11170 * DUF2957 7e-04 30.9 %
:RPS:PFM   479->597 PF03764 * EFG_IV 2e-28 54.7 %
:RPS:PFM   599->679 PF00679 * EFG_C 5e-24 55.6 %
:HMM:PFM   9->281 PF00009 * GTP_EFTU 3.6e-68 49.7 185/189  
:HMM:PFM   478->595 PF03764 * EFG_IV 2.4e-39 52.1 117/120  
:HMM:PFM   600->685 PF00679 * EFG_C 3e-33 47.7 86/89  
:HMM:PFM   323->390 PF03144 * GTP_EFTU_D2 4.2e-17 35.3 68/74  
:BLT:SWISS 1->692 EFG_PELUB 0.0 100.0 %
:PROS 51->66|PS00301|EFACTOR_GTP

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21922.1 GT:GENE fusA GT:PRODUCT translation elongation factor EF-G GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1071259..1073337) GB:FROM 1071259 GB:TO 1073337 GB:DIRECTION - GB:GENE fusA GB:PRODUCT translation elongation factor EF-G GB:NOTE substrain RIMD 0 GB:PROTEIN_ID AAZ21922.1 GB:DB_XREF GI:71062919 GB:GENE:GENE fusA LENGTH 692 SQ:AASEQ MARTHTLNKYRNIGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWNDHRINIIDTPGHVDFTIEVERSLKVLDGAVCVFDGVAGVEPQSETVWRQADKYKVPRICFVNKLDRTGADFYRCVEMIKDRLGCKPLPIQIPIGIEADLSGVVDLVKMKAQVWKNEALGAEWEYKEIPDDLKEISQKYRTELVEMAVEQDEKLMEAYLNGEEIKEEDLVKCIRKGTLNFSFVPITTGSAFKNKGVQPLLDAVINYLPSPIDIGSINGTKPGSEDVVEMKFDDGTGFSALAFKVANDPFVGSLTFIRIYSGTIRTGTAVYNTSKDKEERVGRMLLMHANSREDIKEANTGDIVALAGLKYTITGHTLCDEANPVLLEPMEFPEPVIEIAVEPKTKADQEKMGEALGRLAKEDPSFRVTSDEESGQTIIKGMGELHLDIIVDRMKREFNVEANVGAPQVAYRETLQNASEFEYTHKKQSGGAGQFAKVKLLVEPQEPGSGRSVESKIKGGAIPKEFIPGVEKGIETISDGGILAGFPMIDYKVTILDGLHHDVDSSVLAFELAGRACFKEACTRGTLKLLEPVMRVEVVTPEDYMGDVIGDLNSRRGQISTQENRGNATVITAMVPLANMFGYINSLRSMSQGRAQYSMFFDHYSKVPQNVQDEVTKKIAG GT:EXON 1|1-692:0| SW:ID EFG_PELUB SW:DE RecName: Full=Elongation factor G; Short=EF-G; SW:GN Name=fusA; OrderedLocusNames=SAR11_1119; SW:KW Complete proteome; Cytoplasm; Elongation factor; GTP-binding;Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->692|EFG_PELUB|0.0|100.0|692/692| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003746|"GO:translation elongation factor activity"|Elongation factor| GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 51->66|PS00301|EFACTOR_GTP|PDOC00273| BL:PDB:NREP 1 BL:PDB:REP 5->688|2bm0A|0.0|58.8|662/666| RP:PDB:NREP 1 RP:PDB:REP 9->689|2dy1A|e-145|32.3|651/660| RP:PFM:NREP 4 RP:PFM:REP 11->140|PF00009|4e-30|53.5|129/183|GTP_EFTU| RP:PFM:REP 248->341|PF11170|7e-04|30.9|94/359|DUF2957| RP:PFM:REP 479->597|PF03764|2e-28|54.7|117/118|EFG_IV| RP:PFM:REP 599->679|PF00679|5e-24|55.6|81/88|EFG_C| HM:PFM:NREP 4 HM:PFM:REP 9->281|PF00009|3.6e-68|49.7|185/189|GTP_EFTU| HM:PFM:REP 478->595|PF03764|2.4e-39|52.1|117/120|EFG_IV| HM:PFM:REP 600->685|PF00679|3e-33|47.7|86/89|EFG_C| HM:PFM:REP 323->390|PF03144|4.2e-17|35.3|68/74|GTP_EFTU_D2| GO:PFM:NREP 4 GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF03764|IPR005517| GO:PFM GO:0005525|"GO:GTP binding"|PF00679|IPR000640| RP:SCP:NREP 5 RP:SCP:REP 7->281|1darA2|2e-91|61.0|246/254|c.37.1.8| RP:SCP:REP 260->401|1n0uA1|7e-21|18.7|123/138|b.43.3.1| RP:SCP:REP 404->481|1fnmA4|2e-27|74.4|78/79|d.58.11.1| RP:SCP:REP 475->593|1darA3|1e-29|51.3|119/124|d.14.1.1| RP:SCP:REP 600->688|1darA4|3e-31|66.3|89/90|d.58.11.1| HM:SCP:REP 5->281|2bv3A2|3.1e-109|52.5|276/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 264->403|2bv3A1|5.1e-38|45.5|121/0|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 403->480|1wdtA5|1.2e-28|53.2|77/0|d.58.11.1|1/1|EF-G C-terminal domain-like| HM:SCP:REP 478->597|2bv3A3|1.2e-39|54.2|120/0|d.14.1.1|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 602->691|1n0uA5|1.3e-30|46.7|90/0|d.58.11.1|1/1|EF-G C-terminal domain-like| OP:NHOMO 5736 OP:NHOMOORG 1178 OP:PATTERN 11111111111111111111111211111111111112212221121111111322212121111111 6444744444344434444-4433444444434555545534444533444345533433445343566544555464444432354565552555413544444634552222222222222256666666665544444444437765665345544444466555566444444444444555333334334444444434444445333334443336445444444564544444444445434444446654456656666644455444434544444444444455545545434444444643446544474545556766666666666555666665766556637745343435444434553544458666455676554565554444444444415555554477435554587556774444446677976674444444464454565333333333344434444444444455453555455554544454444344445644444444566653455555444555555645454444444444444455556666666566666556656677677776666333333343333333333333333344444645545566555555655556655565214544444344444444544444444444-44444444444444444445554544444444444444444445444444442544444444444224444444444454645434444444434444444444444445555554444555544444444444446555555555565765555555555444444535556553334344443422223-23344434443333433334443343444453 77128871L66278755756766776566567666667566666555666666666567666767565256655676377677766A8-785576B555557577A18IEC8B66AB4665465DB5C4Jy91AAD46459568466544645F4956A7Kb59767868RE7A778BA*A987AJESL5DEBBD9789 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 691 STR:RPRED 99.9 SQ:SECSTR TTccccGGcEEEEEEEEcTTccHHHHHHHHHHHTTcccccccGGGTcccccccHHHHHTTcccccEEEEEEETTEEEEEEEccccGGGHHHHHHHHHHccEEEEEEETTTcccHHHHHHHHHHHHTTccEEEEEEcGGGcccHHHHHHHHHHHHHcccEEEcEEEEEETTEEEEEEETTTTEEEEEETTcccTEEEEEcccGGGHHHHHHHHHHHHHHHHTTcHHHHHHHHHTccccHHHHHHHHHHHHHTTccEEEEEccTTTTccHHHHHHHHHHHcccHHHHcccHccccTccHEEEccccTTcccEEEEEEEEEETTTEEEEEEEEEEcEEcTTEEEccTTccEEEEEccEEEEETTEEEEEccEETTcEEEEcccTTccTTcEEEccccccGGGccccccccccEEEEEccHHHHHHHHHHHHHHHHHcTTcEEEEcTTTccEEEEEccHHHHHHHGHHHHHHTTccEEEEccccccEEEEcccEEEEEEEEEEETTEEEEEEEEEEEEEccccEcEEEEEcccTTcccGGGHHHHHHHHHHHHTccTTTccccccEEEEEEEEEccTTTccHHHHHHHHHHHHHHHHHHccEEEEEEEEEEEEEEEGGGHHHHHHHHHHTTcEEEEEEEETTEEEEEEEEEGGGcTTHHHHHHHHHTTccEEEEEEEEEEEccHHHHHHHHHHHH# DISOP:02AL 1-5, 691-692| PSIPRED ccccccccccEEEEEEccccccHHHHHHHHHHHHccccccHHHccccEEcccHHHHHHcccEEEEEEEEEEEccEEEEEEEccccccHHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHcccEEEEEccEEEcccccEEEEHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHHccccccHHcccccccccHHHHHHHHHHHcccccccccccccccccccEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEccccEEEEEEEEEEccccEEEEcEEccccEEEEEcccEEEEccEEEccccccccccccccccEEEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEEccccccEEEEEEcHHHHHHHHHHHHHHccccEEEEccEEEEEEEEccccEEEEEEcccccccccEEEEEEEEEccccccccEEEEEcccEEEccHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEcHHHHHHHHHHHHHcccEEEEEEEcccEEEEEEEEcHHHHHHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHcc //