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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : glbN
DDBJ      :glbN         Bacterial-like globin
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  51/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.1.1
:133 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->132 1s56B PDBj 8e-23 39.1 %
:RPS:PDB   18->131 1dlwA PDBj 7e-20 31.6 %
:RPS:SCOP  18->132 1dlwA  a.1.1.1 * 4e-28 31.3 %
:HMM:SCOP  17->135 1mwbA_ a.1.1.1 * 9.2e-30 29.4 %
:RPS:PFM   19->129 PF01152 * Bac_globin 2e-13 30.6 %
:HMM:PFM   18->132 PF01152 * Bac_globin 2.1e-31 33.0 115/120  
:BLT:SWISS 18->132 GLBN_MYCPA 2e-22 40.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22023.1 GT:GENE glbN GT:PRODUCT Bacterial-like globin GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1164385..1164786 GB:FROM 1164385 GB:TO 1164786 GB:DIRECTION + GB:GENE glbN GB:PRODUCT Bacterial-like globin GB:PROTEIN_ID AAZ22023.1 GB:DB_XREF GI:71063020 GB:GENE:GENE glbN LENGTH 133 SQ:AASEQ MTLITLNISIYFKIMTQTLFEKYGGKKTVGQIVINFYQKLMADENLKKFFTNSDMKVLISHQTNFISQALGGPKEYTGLDMKTAHQGMKISQEDFNGVAGHLKQTLEELNVESQDVDTIIGVVAPLSEHIVSK GT:EXON 1|1-133:0| BL:SWS:NREP 1 BL:SWS:REP 18->132|GLBN_MYCPA|2e-22|40.9|115/136| BL:PDB:NREP 1 BL:PDB:REP 18->132|1s56B|8e-23|39.1|115/135| RP:PDB:NREP 1 RP:PDB:REP 18->131|1dlwA|7e-20|31.6|114/116| RP:PFM:NREP 1 RP:PFM:REP 19->129|PF01152|2e-13|30.6|111/120|Bac_globin| HM:PFM:NREP 1 HM:PFM:REP 18->132|PF01152|2.1e-31|33.0|115/120|Bac_globin| GO:PFM:NREP 2 GO:PFM GO:0015671|"GO:oxygen transport"|PF01152|IPR001486| GO:PFM GO:0019825|"GO:oxygen binding"|PF01152|IPR001486| RP:SCP:NREP 1 RP:SCP:REP 18->132|1dlwA|4e-28|31.3|115/116|a.1.1.1| HM:SCP:REP 17->135|1mwbA_|9.2e-30|29.4|119/0|a.1.1.1|1/1|Globin-like| OP:NHOMO 64 OP:NHOMOORG 60 OP:PATTERN ------------------------1--1--11------------------------------------ --1-1----------1111-11--111111111111-----111-------------------------------------------1----------------------------------------------------------1-1111-----------11----1-------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------1---1---------------------------------------------------------1--------------------------------------------------------1---------------------------------------------------11---------------------------------------------------1-------------------------------------1-------1-1-----------1---------------------------------------------------------------------------------------------------------11111-1-1--------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------321-----2-------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 88.7 SQ:SECSTR ###############cccHHHHTTcHHHHHHHHHHHHHHHHTcTTTGGGGTTccHHHHHHHHHHHHHHHTTcccccccccHHHHHTTccccHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHTTHHHHccc DISOP:02AL 133-134| PSIPRED ccHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc //