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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : gmhB
DDBJ      :gmhB         D-glycero-D-manno-heptose 1,7 bisphophate phosphatase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  320/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:163 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->150 2gmwB PDBj 5e-21 33.3 %
:RPS:PDB   25->147 2cfsA PDBj 3e-08 15.5 %
:RPS:SCOP  5->148 2o2xA1  c.108.1.19 * 1e-27 31.9 %
:HMM:SCOP  1->150 1yj5A1 c.108.1.9 * 2.9e-29 28.5 %
:RPS:PFM   8->133 PF08645 * PNK3P 1e-12 40.5 %
:HMM:PFM   24->134 PF08645 * PNK3P 6.8e-16 32.3 99/158  
:BLT:SWISS 5->154 GMHB_ANETH 3e-28 40.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21367.1 GT:GENE gmhB GT:PRODUCT D-glycero-D-manno-heptose 1,7 bisphophate phosphatase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(538725..539216) GB:FROM 538725 GB:TO 539216 GB:DIRECTION - GB:GENE gmhB GB:PRODUCT D-glycero-D-manno-heptose 1,7 bisphophate phosphatase GB:PROTEIN_ID AAZ21367.1 GB:DB_XREF GI:71062364 GB:GENE:GENE gmhB LENGTH 163 SQ:AASEQ MIMKKCLFLDRDGTINKNLGYIYKYENFIWLKDAKKAIQYAYKKDYLIVIISNQSGVSRGYFKKKDCDLLNLKINESLKKFKCKIHKFYYAFYHPNFKKKKYKASYRKPNPGLFFLAKKKMNIDLSKSFMIGDLKSDQIAAKKAGVRFKLKRNNLLKEVKSII GT:EXON 1|1-163:0| BL:SWS:NREP 1 BL:SWS:REP 5->154|GMHB_ANETH|3e-28|40.0|150/179| SEG 98->103|kkkkyk| BL:PDB:NREP 1 BL:PDB:REP 7->150|2gmwB|5e-21|33.3|144/184| RP:PDB:NREP 1 RP:PDB:REP 25->147|2cfsA|3e-08|15.5|103/291| RP:PFM:NREP 1 RP:PFM:REP 8->133|PF08645|1e-12|40.5|116/142|PNK3P| HM:PFM:NREP 1 HM:PFM:REP 24->134|PF08645|6.8e-16|32.3|99/158|PNK3P| RP:SCP:NREP 1 RP:SCP:REP 5->148|2o2xA1|1e-27|31.9|144/209|c.108.1.19| HM:SCP:REP 1->150|1yj5A1|2.9e-29|28.5|137/0|c.108.1.9|1/1|HAD-like| OP:NHOMO 355 OP:NHOMOORG 325 OP:PATTERN -----------------------------------1-1------------------------11---- 1-1----------------------------------------------------------------------------------111-----------------212-1---------------111111-11121--11-111--112111----------111-----1-1-11-1---1-----111--------------1-1-1-----------1-------------------------------------------------------11---------------------------------------------1-1-------------------1-------1----------------11-1-1111-----1111111111111-------------------1-11-------------1111----------------------1-111-----------------------------1-----11111-------3333---132332-----2----11-11----111-----2-------------111111111-1--111---1111111111-------1-1-1-1111111111111111111111111-1----111111111111111111111---1---------11111111111111111-1111111111111111111111111211111111111111111111111111-111111111121-11-222221111---1-111111111111111-----------1-11--111-1-11-111----------11111111111111-----------------1----------------------------------------------------1-1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 90.8 SQ:SECSTR ##TccEEEEcccTTTEEcHHHHHHccTTccHHHHHHHHHHHTTcTTcEEEEcccccEEEcTTccEEEcHHHHTGGGccEEEHHHHHHHHHHHTcccEEEEEEEccccTTcTHHHHHHTTcccccGGGEEEEEcTTTHHHHHHHTTcEEEE############# DISOP:02AL 1-2| PSIPRED cccccEEEEEcccEEEccccccccHHHEEEcccHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHcccHHHEEEEEccHHHHHHHHHccccEEEEcccccccccEEc //