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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ilvB
DDBJ      :ilvB         acetolactate synthase large subunit (ALS III)
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  764/915 : Eukaryota  173/199 : Viruses  0/175   --->[See Alignment]
c.31.1c.36.1c.92.2
:588 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->562 1t9dA PDBj e-143 47.2 %
:RPS:PDB   6->549 1bfdA PDBj e-137 21.0 %
:RPS:SCOP  7->529 1fp4B  c.92.2.3 * 2e-86 9.6 %
:HMM:SCOP  1->176 1ybhA2 c.36.1.5 * 4.5e-63 48.6 %
:HMM:SCOP  186->367 1jscA1 c.31.1.3 * 1.3e-62 51.2 %
:HMM:SCOP  374->573 2djiA3 c.36.1.9 * 1.1e-67 44.7 %
:RPS:PFM   6->167 PF02776 * TPP_enzyme_N 7e-53 55.6 %
:RPS:PFM   195->313 PF00205 * TPP_enzyme_M 3e-29 49.6 %
:RPS:PFM   415->546 PF02775 * TPP_enzyme_C 2e-32 46.2 %
:HMM:PFM   6->171 PF02776 * TPP_enzyme_N 1.2e-64 47.6 166/172  
:HMM:PFM   400->547 PF02775 * TPP_enzyme_C 4e-53 44.2 147/150  
:HMM:PFM   195->329 PF00205 * TPP_enzyme_M 2.2e-40 41.4 133/137  
:BLT:SWISS 3->578 ILVI_HAEIN e-154 50.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20828.1 GT:GENE ilvB GT:PRODUCT acetolactate synthase large subunit (ALS III) GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(2105..3871) GB:FROM 2105 GB:TO 3871 GB:DIRECTION - GB:GENE ilvB GB:PRODUCT acetolactate synthase large subunit (ALS III) GB:PROTEIN_ID AAZ20828.1 GB:DB_XREF GI:71061825 GB:GENE:GENE ilvB LENGTH 588 SQ:AASEQ MPKLYSGAEIVFKCLEDQKVEHIFGYPGGAVLPIYDELKNHPTIKHILVRHEQGAGHAAEGYARSTGKPGVVLVTSGPGATNVVTALTDAYMDSVPLVCISGQVPTHLIGTDAFQECDTTGITRPCTKHNWLVKDINDLPRIMHEAFEVATTGRPGPVLVDIPKDIQFAKTKYSKPNKDKKVVTKNLNRFNQKNIDQLIELMSKSKKPIFYTGGGVINSGPKASELLRELVSLTGFPITSTLQGLGAYPGNDNQFLGMLGMHGTYEANNAMHDCDLLINIGARFDDRITGKIDEFSPKSKKVHIDIDPSSINKIVKVDLSIVGDVSDVISSTTKTLKKKKLNLEKSNKQKISNWWLQIEKWRTKQSLSFVNSDTIIKPQYAVQRLYELTKNSDTYITTEVGQHQMWAAQHYKFDKPNRWMTSGGLGTMGYGLPAAIGVQVAHPKKLVVDIAGEASILMNMQEISTAVQYNLPIKIFILNNQYMGMVRQWQELLHEKNYSESYSKALPDFVKLAEAYGCVGIRAKDPSELDEKIEEMINTDRPVIFDCLVDQGENCFPMIPSGKPHNQMLLGPKDQDANKITGKGKALV GT:EXON 1|1-588:0| BL:SWS:NREP 1 BL:SWS:REP 3->578|ILVI_HAEIN|e-154|50.8|565/573| SEG 317->350|vdlsivgdvsdvissttktlkkkklnleksnkqk| BL:PDB:NREP 1 BL:PDB:REP 6->562|1t9dA|e-143|47.2|544/596| RP:PDB:NREP 1 RP:PDB:REP 6->549|1bfdA|e-137|21.0|518/523| RP:PFM:NREP 3 RP:PFM:REP 6->167|PF02776|7e-53|55.6|162/170|TPP_enzyme_N| RP:PFM:REP 195->313|PF00205|3e-29|49.6|117/138|TPP_enzyme_M| RP:PFM:REP 415->546|PF02775|2e-32|46.2|132/139|TPP_enzyme_C| HM:PFM:NREP 3 HM:PFM:REP 6->171|PF02776|1.2e-64|47.6|166/172|TPP_enzyme_N| HM:PFM:REP 400->547|PF02775|4e-53|44.2|147/150|TPP_enzyme_C| HM:PFM:REP 195->329|PF00205|2.2e-40|41.4|133/137|TPP_enzyme_M| GO:PFM:NREP 5 GO:PFM GO:0030976|"GO:thiamin pyrophosphate binding"|PF02776|IPR012001| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF00205|IPR012000| GO:PFM GO:0030976|"GO:thiamin pyrophosphate binding"|PF00205|IPR012000| GO:PFM GO:0003824|"GO:catalytic activity"|PF02775|IPR011766| GO:PFM GO:0030976|"GO:thiamin pyrophosphate binding"|PF02775|IPR011766| RP:SCP:NREP 1 RP:SCP:REP 7->529|1fp4B|2e-86|9.6|491/522|c.92.2.3| HM:SCP:REP 1->176|1ybhA2|4.5e-63|48.6|173/0|c.36.1.5|1/2|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 186->367|1jscA1|1.3e-62|51.2|172/0|c.31.1.3|1/1|DHS-like NAD/FAD-binding domain| HM:SCP:REP 374->573|2djiA3|1.1e-67|44.7|197/0|c.36.1.9|2/2|Thiamin diphosphate-binding fold (THDP-binding)| OP:NHOMO 3268 OP:NHOMOORG 993 OP:PATTERN 11-1--5754454564-31221143--21122243222222221312213343111-----2421-11 4361832222224256855-53337C555555455553EF2224323-222176654311535245B88621222112-211811111224113--111-1111142211---------------21122111111233331111832523332211113111322333721111111211111211111-134555554571465536334434545235242-4444432534444444444444434444122145112-27622553331344231111---22222222222222-------------211222111122135-------5-42133111-112--2122165222121221112--1-112222-11-124CAA2149357633333332316-66855A49572-644346A775896414167942357675555555533312332-----------------------------3335226DA888899987666699DE99995796I78A724654333228355B73333111311111111112522-A22212333233412214112443323343521111111111-1-------1111211322241312222443522432332423343-1-311111111156543555666576766-6646767656666665664767653357566556667668664865666651-65555554555511---1---213232762222222-22213222333332312432A99948464588632332----1---313253333322222332222222211111111331132------------------------111----------11--1-111222 ----22--1-----253323334968733222223224242342443224324922231111311113-2442221331432222134-13232211111111523-24-4232222----111111317F2-3221-1-1-131111122--42112337416321112223511111812123612A264223111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 586 STR:RPRED 99.7 SQ:SECSTR ##cEEcHHHHHHHHHHHTTccEEEEcccGGGHHHHTTcHHcTTcEEEEcccHHHHHHHHHHHHHHHTccEEEEEEHHHHHHHTHHHHHHHHHHTccEEEEEEEccHHHHTTTcTccTTGGGTTTTcccEEEccccGGGHHHHHHHHHHHHHccccccEEEEEEGGGTTccccGGGGGGTTcccccccccccHHHHHHHHHHHHHccccEEEEcHHHHHHHHTcHHHHHHHHHHHTccEEccccccccccTTcTTEEEEcccGcHHHHHHHHTTccEEEEEcccTTccccccccccccTTcEEEEEccHHHHHHccccccccEEEcccHHHHHccEEEEccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccTTcEEEEEcGGGHHHHHHHcccccTTcEEEcTTccccccHHHHHHHHHHHcTTccEEEEEEHHHHTTTGGGHHHHHHHTcccEEEEEEccccHHHHHHHHHTTccccccccccccccHHHHHHHTTcEEEEEccHHHHHHHHHHHHHccccEEEEEEcccccccTTTTcTTccGGGccccHHHHHHHHHHTTTcHHH DISOP:02AL 1-2| PSIPRED ccccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHccccEEEccccccccccccccccccHHccccHHHHHHHHcccEEEEEccccccccccccHHHcccccEEEEcccHHHcccEEcccEEEEEcHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEcHHHHHcHHHHHHHHHccccEEEEEEEcccccHHHHHHHHccccccccccccccccHHHHHHHccccEEEEccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHccccHHHHHHHHHHcccccc //