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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ilvH
DDBJ      :ilvH         acetolactate synthase small subunit
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  648/915 : Eukaryota  107/199 : Viruses  0/175   --->[See Alignment]
d.58.18d.58.3
:182 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->181 2f1fA PDBj 8e-21 36.7 %
:RPS:PDB   19->153 2dtjA PDBj 2e-11 13.6 %
:RPS:SCOP  34->176 1t1eA2  d.58.3.2 * 5e-16 9.7 %
:HMM:SCOP  19->95 2f1fA1 d.58.18.6 * 1.5e-14 38.2 %
:HMM:SCOP  98->183 2pc6A1 d.58.18.6 * 4.6e-17 31.4 %
:RPS:PFM   104->177 PF10369 * ALS_ss_C 2e-08 35.1 %
:HMM:PFM   104->177 PF10369 * ALS_ss_C 7.9e-20 33.8 74/75  
:HMM:PFM   20->85 PF01842 * ACT 3.4e-10 25.0 64/66  
:BLT:SWISS 13->180 ILVH_AQUAE 2e-24 37.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20827.1 GT:GENE ilvH GT:PRODUCT acetolactate synthase small subunit GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1556..2104) GB:FROM 1556 GB:TO 2104 GB:DIRECTION - GB:GENE ilvH GB:PRODUCT acetolactate synthase small subunit GB:PROTEIN_ID AAZ20827.1 GB:DB_XREF GI:71061824 GB:GENE:GENE ilvH LENGTH 182 SQ:AASEQ MVKSKSAYSTPSKSGKIDTHIIVVWVDNEASVLSRVVGLFSGRGYNIESLAVAEIDHKKNLSRITIVTTGTPQVIEQIVLQLKKLVPVHNVVNFKREDKKVIFKEMALLKIVANSIKIKKALNACKKYNPVILDQTNKSAVIQITALRREIDSMIKNLKPLGLVSASRTGAVAMTRGAEILN GT:EXON 1|1-182:0| BL:SWS:NREP 1 BL:SWS:REP 13->180|ILVH_AQUAE|2e-24|37.6|165/192| BL:PDB:NREP 1 BL:PDB:REP 21->181|2f1fA|8e-21|36.7|158/163| RP:PDB:NREP 1 RP:PDB:REP 19->153|2dtjA|2e-11|13.6|132/164| RP:PFM:NREP 1 RP:PFM:REP 104->177|PF10369|2e-08|35.1|74/75|ALS_ss_C| HM:PFM:NREP 2 HM:PFM:REP 104->177|PF10369|7.9e-20|33.8|74/75|ALS_ss_C| HM:PFM:REP 20->85|PF01842|3.4e-10|25.0|64/66|ACT| RP:SCP:NREP 1 RP:SCP:REP 34->176|1t1eA2|5e-16|9.7|134/179|d.58.3.2| HM:SCP:REP 19->95|2f1fA1|1.5e-14|38.2|76/0|d.58.18.6|1/1|ACT-like| HM:SCP:REP 98->183|2pc6A1|4.6e-17|31.4|86/0|d.58.18.6|1/1|ACT-like| OP:NHOMO 827 OP:NHOMOORG 786 OP:PATTERN -----------------------11--111111211111111111111111111------------11 1111111111111111111-111111111111111111111111111-1111111111--111-11111111111111-111-11111-------------11111-111---------------1111111111111-1111111111111111111111111111111111111111111111-1111-11111111111111111111111111111111--11111112-----------------------------------------------------11111111111111-------------111111111-11-11-------1-11-11----1-1--112213222211-211111--1-111111-----111111111111111111111111-11111111111-1111111111111111-11111111111111111111111111-----------------------------11111111111111111111111111111111111111111111111111111111111111111111111111111-1111112112221-1111111121111-12411111111111-1-------11111111111111-1111111111111111111111---111111111111111111111111111-11-11111111111111111111111-111111111111111111111111--111111111111-------------111111111-1-11111--111111111111111111111111111111---------111111111111111--------------1111111111--------------------------------------1--1-111111 --------------111-111111111111111111111111111111111111111111-1111111111111111111111111-1-12111111111--1212---------------------------------------------------------------------1111A111111113151--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 163 STR:RPRED 89.6 SQ:SECSTR ##################EEEEEEEEEccTTHHHHHHHHHHHTTccccEEEEccccTTTTTcEEEEEEEEEHHHHHHHHHHHHTTTTTTTccEEEEEccEEEEEEEEEEccTTcHHHHHHHHHHHHHTTccccEEEEETTEEEEEEEGGGHHHHHHHHTTTcEEEEEEcccEEEEcTTccc# DISOP:02AL 1-5, 8-17, 179-182| PSIPRED cccccccEEcccccccccEEEEEEEEEccccHHHHHHHHHHcccccccEEEEEcccccccEEEEEEEEEEcHHHHHHHHHHHHccccEEEEEEccccccccEEEEEEEEEEEcccccHHHHHHHHHHcccEEEEEcccEEEEEEEccHHHHHHHHHHHHHcccEEEEEccEEEEcccccccc //