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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : lexA
DDBJ      :lexA         repressor LexA
Swiss-Prot:LEXA_PELUB   RecName: Full=LexA repressor;         EC=3.4.21.88;

Homologs  Archaea  0/68 : Bacteria  607/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5b.87.1
:225 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->224 1jhhA PDBj 2e-15 26.9 %
:RPS:PDB   2->62 1dpuA PDBj 4e-05 25.4 %
:RPS:PDB   120->224 1ay9A PDBj 2e-19 31.1 %
:RPS:SCOP  2->64 1jhfA1  a.4.5.2 * 2e-06 22.2 %
:RPS:SCOP  103->224 1jhcA  b.87.1.1 * 2e-22 30.6 %
:HMM:SCOP  2->70 1jhfA1 a.4.5.2 * 2.1e-15 42.0 %
:HMM:SCOP  100->224 1jhfA2 b.87.1.1 * 2.3e-31 37.9 %
:RPS:PFM   2->63 PF01726 * LexA_DNA_bind 1e-09 41.9 %
:HMM:PFM   2->63 PF01726 * LexA_DNA_bind 2.2e-16 37.1 62/65  
:HMM:PFM   141->204 PF00717 * Peptidase_S24 2.2e-16 33.3 63/70  
:BLT:SWISS 1->225 LEXA_PELUB e-124 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21734.1 GT:GENE lexA GT:PRODUCT repressor LexA GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(886362..887039) GB:FROM 886362 GB:TO 887039 GB:DIRECTION - GB:GENE lexA GB:PRODUCT repressor LexA GB:PROTEIN_ID AAZ21734.1 GB:DB_XREF GI:71062731 GB:GENE:GENE lexA LENGTH 225 SQ:AASEQ MLTKKQKNLLLFINKKLRASGVSPSYEEMKDSLNLKSKSGIHRLISALEERGFIRRLAHKARALEVIKLPETASANDIYNSFSPSVIKGGLDTENTNLNEMEIPVLGSIAAGTPVEAIQNEVSRIPLPSNLEKNGQYFGLKVQGDSMIEAGINEGDTVIIKRSDTADNGKIVVALIDEHEAMLKRIRRKGKTVALESANRNYETKIFGPDRVKVQGVLVSLYRNF GT:EXON 1|1-225:0| SW:ID LEXA_PELUB SW:DE RecName: Full=LexA repressor; EC=3.4.21.88; SW:GN Name=lexA; OrderedLocusNames=SAR11_0921; SW:KW Autocatalytic cleavage; Complete proteome; DNA damage; DNA repair;DNA replication; DNA-binding; Hydrolase; Repressor; SOS response;Transcription; Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->225|LEXA_PELUB|e-124|100.0|225/225| GO:SWS:NREP 8 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0009432|"GO:SOS response"|SOS response| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| BL:PDB:NREP 1 BL:PDB:REP 2->224|1jhhA|2e-15|26.9|193/197| RP:PDB:NREP 2 RP:PDB:REP 2->62|1dpuA|4e-05|25.4|59/69| RP:PDB:REP 120->224|1ay9A|2e-19|31.1|103/108| RP:PFM:NREP 1 RP:PFM:REP 2->63|PF01726|1e-09|41.9|62/64|LexA_DNA_bind| HM:PFM:NREP 2 HM:PFM:REP 2->63|PF01726|2.2e-16|37.1|62/65|LexA_DNA_bind| HM:PFM:REP 141->204|PF00717|2.2e-16|33.3|63/70|Peptidase_S24| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF01726|IPR006199| GO:PFM GO:0006508|"GO:proteolysis"|PF01726|IPR006199| RP:SCP:NREP 2 RP:SCP:REP 2->64|1jhfA1|2e-06|22.2|63/71|a.4.5.2| RP:SCP:REP 103->224|1jhcA|2e-22|30.6|121/130|b.87.1.1| HM:SCP:REP 2->70|1jhfA1|2.1e-15|42.0|69/0|a.4.5.2|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 100->224|1jhfA2|2.3e-31|37.9|124/126|b.87.1.1|1/1|LexA/Signal peptidase| OP:NHOMO 675 OP:NHOMOORG 608 OP:PATTERN -------------------------------------------------------------------- 111-111111111111111-11111111111111112222111111111111111111--111-2121111111111111111--1-1--------------------1---------------1-----------11111111111111111----11111111-1111-2111222121121----11-22111111211111112121111111111111111111111221111112111111-1-11111-11111111111111111111-----------------------------------------------2112211111111112122121111111112231122211221---11--1--1111-1111111111111111111111111111-11111111111-1111111111111111111111111111111111111111111-----------------------------1111111111111111111111111111111111111111111112111111111111----1----------11111121---2-------2-2112113111111-2-------------------------11-1111111111------11111-111--11----112------11111111111111111-11111111111111111111111111-1111111111111111111111111-111111111111-------------11121111111111111111----------111111222212232-222---------1----11111---1111212112221111--21111112------------------------------------1111111111-2- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 99.6 SQ:SECSTR #cccHHHHHHHHHHHHHHTTTGHEEHHHHTTTTTccHHHTccHHHHHHHTTTTccccHHHHHHTTTTTccGGGTcHHHHHHHHHHHHHHHcccccccccccccccccccccTTTTcccccccccccHHHHHcccGGEEEEEccccTTGGGTccTTcEEEEEccccccTTcEEEEEETTTEEEEEEEEccccccEEEcccTTcccEEccTccEEEEEEEEEEEccE PSIPRED cccHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccHHHccccccccccccccccccEEEEEccccccccccccEEEEccHHHcccccEEEEEEEcccccccccccccEEEEEcccccccccEEEEEEccccEEEEEEEEEccEEEEEEcccccccEEEcHHHEEEEEEEEEEEEcc //