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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : livH
DDBJ      :livH         Branched-chain amino acid transport system/permease component
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  333/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:336 amino acids
:PSIPRED
:HMM:PFM   18->323 PF02653 * BPD_transp_2 2.6e-37 25.9 259/267  
:BLT:SWISS 19->330 LIVH_SALTY 2e-20 35.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22153.1 GT:GENE livH GT:PRODUCT Branched-chain amino acid transport system/permease component GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1286894..1287904) GB:FROM 1286894 GB:TO 1287904 GB:DIRECTION - GB:GENE livH GB:PRODUCT Branched-chain amino acid transport system/permease component GB:PROTEIN_ID AAZ22153.1 GB:DB_XREF GI:71063150 GB:GENE:GENE livH LENGTH 336 SQ:AASEQ MEFLNAIILLLNYIFMPALTYGSQLALGAIFVTLIYGILRFANFATGDMMAFGTMVTILFTWYFQSLGISLGVLPTALLAIPFAIVLTIGYMLLIDKFVFRYYRVSKSPPVQLAMVSIGVMFVTQAVVRIIIGPSDQRFFDGEKFIIKASEFKEMTGLNEGLAIKSSQVLTIFVTIVLVSILFWFLNKTKTGKSMRAYSDNEDLALLSGIDPKRVVMITWIIAGILATIGGALYGLDKSFKPFTYFNNMLPIFAAAIVGGIGNPFGAFLGGYVIAFSEIFLTYAYKKFFMYVLPASMEPETLVQLLSTDYKFAVSFSILVIVLLYRPNGIFKGKVL GT:EXON 1|1-336:0| BL:SWS:NREP 1 BL:SWS:REP 19->330|LIVH_SALTY|2e-20|35.5|279/308| TM:NTM 9 TM:REGION 1->23| TM:REGION 32->54| TM:REGION 74->96| TM:REGION 111->133| TM:REGION 165->187| TM:REGION 216->238| TM:REGION 253->275| TM:REGION 277->299| TM:REGION 313->332| SEG 221->236|iiagilatiggalygl| HM:PFM:NREP 1 HM:PFM:REP 18->323|PF02653|2.6e-37|25.9|259/267|BPD_transp_2| OP:NHOMO 495 OP:NHOMOORG 347 OP:PATTERN ---1--------------11-1-12---4-2----11----------1----------------3-1- ---11---111----------------------111-211--------------1-----11-----11-11----11----1----------------------1---------------------1-----2--11111----111111111111------1111111-------------212--11-----------------------------221---------1-------------------------11-----11--11----1-----------111------------------------1--------111--311111-1-1---11----2----1--1211-322--1----2111---------11---523---4223222222122221---1--1--12--1--2--121-11-3---3112233212--------1----213-----------------------------1-----133123333321---133212222122333133-1111-1-22211343211----1-----------121144-1-5-211--121-11-2---12111--21--1-11111-----------11----1-211-----1--------------------------------1121-211111111111-11111111111111111113231111-111111111111111111111111--111111111111---------------111-------------------------2-11112222-11111212--------------------1-------------------2-------------------------------------------2-2---3111--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccc //