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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : manC
DDBJ      :manC         mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  504/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
b.82.1c.68.1
:400 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->273 2cu2A PDBj 1e-20 27.8 %
:RPS:PDB   1->274 2cu2A PDBj 5e-21 25.9 %
:RPS:PDB   293->400 3cjxE PDBj 2e-16 15.2 %
:RPS:SCOP  1->274 2cu2A2  c.68.1.20 * 3e-34 24.5 %
:RPS:SCOP  293->399 1fi2A  b.82.1.2 * 1e-14 12.1 %
:HMM:SCOP  3->275 1lvwA_ c.68.1.6 * 1.5e-36 23.5 %
:HMM:SCOP  180->399 1j58A_ b.82.1.2 * 9e-41 28.3 %
:RPS:PFM   6->193 PF00483 * NTP_transferase 3e-06 25.4 %
:RPS:PFM   293->395 PF01050 * MannoseP_isomer 4e-29 50.5 %
:HMM:PFM   5->281 PF00483 * NTP_transferase 3.8e-47 28.6 241/248  
:HMM:PFM   271->395 PF01050 * MannoseP_isomer 1.7e-41 44.8 125/151  
:BLT:SWISS 5->273,293->400 ALGA_PSEFL 2e-38 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21770.1 GT:GENE manC GT:PRODUCT mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 947084..948286 GB:FROM 947084 GB:TO 948286 GB:DIRECTION + GB:GENE manC GB:PRODUCT mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase GB:PROTEIN_ID AAZ21770.1 GB:DB_XREF GI:71062767 GB:GENE:GENE manC LENGTH 400 SQ:AASEQ MKIRPVILCGGAGTRLWPNSKNHQAKQFIDFGNWTLLGKTLERVKSSTFDVPIISTNLKYLKEVKKHLKKHKISKYKIVLEPAKRNTAPAILASALIKDIPNEQPLMFFAADHLIEKANIFNKAINKNKTNLTDQNIFIFGIKPTSPSSEYGYFLTKKVKGNINKVTKFIEKPKEAKAKQVIKQKGYWNSGMFFLRKDSIINNFKKYQPTMYKNCLNAVSKAKLKDNTYYLNKASFEKATAKSFDYAILEKTKQINAIKLDIPWSDLGSWKEILKMYDKNKNKYYKKKNVYYRPWGRYVNLFEGKGFLIKELFVKPKGVLSLQKHHHRSEHWFVTQGTPKITLNKDSFFRKKNDHIFIPLEAIHRIENKGTKPVKIIEAQVGSILKEGDIIRFQDVYGRT GT:EXON 1|1-400:0| BL:SWS:NREP 1 BL:SWS:REP 5->273,293->400|ALGA_PSEFL|2e-38|31.6|377/483| SEG 58->80|lkylkevkkhlkkhkiskykivl| SEG 117->129|kanifnkainknk| SEG 275->292|kmydknknkyykkknvyy| BL:PDB:NREP 1 BL:PDB:REP 1->273|2cu2A|1e-20|27.8|259/335| RP:PDB:NREP 2 RP:PDB:REP 1->274|2cu2A|5e-21|25.9|259/335| RP:PDB:REP 293->400|3cjxE|2e-16|15.2|105/156| RP:PFM:NREP 2 RP:PFM:REP 6->193|PF00483|3e-06|25.4|177/238|NTP_transferase| RP:PFM:REP 293->395|PF01050|4e-29|50.5|103/151|MannoseP_isomer| HM:PFM:NREP 2 HM:PFM:REP 5->281|PF00483|3.8e-47|28.6|241/248|NTP_transferase| HM:PFM:REP 271->395|PF01050|1.7e-41|44.8|125/151|MannoseP_isomer| GO:PFM:NREP 4 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00483|IPR005835| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF00483|IPR005835| GO:PFM GO:0005976|"GO:polysaccharide metabolic process"|PF01050|IPR001538| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01050|IPR001538| RP:SCP:NREP 2 RP:SCP:REP 1->274|2cu2A2|3e-34|24.5|261/268|c.68.1.20| RP:SCP:REP 293->399|1fi2A|1e-14|12.1|107/201|b.82.1.2| HM:SCP:REP 3->275|1lvwA_|1.5e-36|23.5|230/295|c.68.1.6|1/1|Nucleotide-diphospho-sugar transferases| HM:SCP:REP 180->399|1j58A_|9e-41|28.3|219/0|b.82.1.2|1/1|RmlC-like cupins| OP:NHOMO 781 OP:NHOMOORG 530 OP:PATTERN -----------------------1----1--------1-111-11-11-1222-1111111---1--- 111--------------------------------------------21-1-------11--31------------------11111-222313111--21111121121---------------22222212212--------112332333222222222233113333121121121111-111111-1-----------1----1-------1-11----1------13------------------------------------------------------------------------------------------2--31111111111211111211-1----2-11--12-21---11-2--1-111111-----211112121111222222222221-22122431121-11111121111111111211211111-1111111111111111--------------11-11------1-111111111----4433442244422363333234552-2111-1-221-1-1222-111122111-------11121111111221111111122322222211111-32--11-------1111111111-121321-22111-111--1------1------------1111------1111-2-1222112111-2112121221212221222-2111---2122222222222222111-11111-111-111111-1----11111111111121---------------------1---11323323233211212332121222211----111111-1-1111111111111111-11111111------------------------------------111111-11111- ------------------------------------------------------------------------------------------------------1------------------------------------------------------------1---------1--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 95.5 SQ:SECSTR ccEEEEEEcccccGGGTTTccTTccGGGccGGGccHHHHHHHHHTTTccGGGEEEEEcHHHEGGGHHHHGGGccccEEEEEccccHHHHHHHHHHHHHTcccccEEEEEEcccEEccHHHHHHHHHHHHHHccTTcEEEEEEccccccccccEEEEEEEETTEEEEEEEEccccHHHHHHHHHTTcEEEEEEEEEcHHHHHHHHHHHcHHHHHHHHHHHTTcHTTccEEEcHHHHHHTcccccHHHHTGGGcccEEEEEEcccEEccccTTHHH##################GcTTEEEEEEEETTTTEEEEEEcTTccccEccEEEcccEEEEEEcccEETTcTTTccccTTEEEEEcTTcEEcEEccTTccccEEEcTTccEEEEEcHHHHHHHHHHH DISOP:02AL 316-319, 399-400| PSIPRED ccEEEEEEEccccEEccccccccccccEEEcccccHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccEEcccHHHHHHHHHHHHHHccccEEEEEEEEccccccEEEEEEcccccccEEEEEEEEcccccHHHHHHHcccEEEEcEEEEcHHHHHHHHHHHcHHHHHHHHHHHHcccccccccEEcHHHHHccccccccccEEcccccEEEEEccccHHHcccHHHHHHHcccHHHHHHHccccEEcccccEEEEEccccEEEEEEEEccccccHHHHcccccccEEEEccEEEEEEccEEEEEccccEEEEccccEEEEEccccccEEEEEEccccccccccEEEEEcccccc //