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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : map
DDBJ      :map          methionine aminopeptidase
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  907/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
d.127.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->244 1xnzA PDBj 5e-72 51.9 %
:RPS:PDB   9->248 2bb7A PDBj 2e-62 51.2 %
:RPS:SCOP  9->245 1qxwA  d.127.1.1 * 2e-62 32.9 %
:HMM:SCOP  8->244 1o0xA_ d.127.1.1 * 2e-77 44.7 %
:RPS:PFM   10->214 PF00557 * Peptidase_M24 4e-30 39.0 %
:HMM:PFM   9->237 PF00557 * Peptidase_M24 5.5e-46 32.2 202/203  
:BLT:SWISS 8->255 AMPM_RICPR 4e-85 57.7 %
:PROS 163->181|PS00680|MAP_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21939.1 GT:GENE map GT:PRODUCT methionine aminopeptidase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1090764..1091534 GB:FROM 1090764 GB:TO 1091534 GB:DIRECTION + GB:GENE map GB:PRODUCT methionine aminopeptidase GB:PROTEIN_ID AAZ21939.1 GB:DB_XREF GI:71062936 GB:GENE:GENE map LENGTH 256 SQ:AASEQ MPDYLEKFEKMRVAGNLAARTLDMLTDNIKPGVTTEFVDKLGYEFIRDNGGYSAPLFYRGFKKSLCTSLNHVVCHGIPSDRVLVEGDALNVDVTAIVDEHYGDTSRMFCIGKTPVKVNNLIDATYESMMRAINLLKPGLKLGDIGYEIQSFIEKKGYSVVRDFCGHGISTTFHEPPNILHYGRRNTGMELRPGMTFTIEPMINIGEWDVKMLKDGWTAVTKDKSLSAQFEHTLGITENGYEIFTESVKGYSKPPYL GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 8->255|AMPM_RICPR|4e-85|57.7|248/259| PROS 163->181|PS00680|MAP_1|PDOC00575| BL:PDB:NREP 1 BL:PDB:REP 6->244|1xnzA|5e-72|51.9|239/262| RP:PDB:NREP 1 RP:PDB:REP 9->248|2bb7A|2e-62|51.2|240/258| RP:PFM:NREP 1 RP:PFM:REP 10->214|PF00557|4e-30|39.0|195/203|Peptidase_M24| HM:PFM:NREP 1 HM:PFM:REP 9->237|PF00557|5.5e-46|32.2|202/203|Peptidase_M24| GO:PFM:NREP 1 GO:PFM GO:0009987|"GO:cellular process"|PF00557|IPR000994| RP:SCP:NREP 1 RP:SCP:REP 9->245|1qxwA|2e-62|32.9|237/249|d.127.1.1| HM:SCP:REP 8->244|1o0xA_|2e-77|44.7|237/249|d.127.1.1|1/1|Creatinase/aminopeptidase| OP:NHOMO 2034 OP:NHOMOORG 1140 OP:PATTERN 112-1-2111111111-21111--1111---------------1111-1-----22222331111-1- 1231422222233232222-23332422222233333343121332323223433224113332524433211111111132121111222212111--1121113221211111111221111311111111111233122222212312222211111111231222221111111111111311111122466666666466666642443466744454442112237433333333333333332232313122122121133222311222212232122222222222222222222222222222222222222223213333333332325332332321113221122232222222222111321111211111112111111111111111111112-222221221121222222222222312211131111111111111111111112111111122111111111111111111111111211111112223222222222222222222231111111111111122122112112112111111111111122122223221322221211112114323222111-1111111211111111111111111112122121211111111222111111111-1111111111111111212112222212-12211221211221121112222121211111111111111112111111111222222211222111111111222211412111111111111111222222211111222222222122212221111111111111111111212112221211111111111122211111111111111111112-22222111112211211111222121222111 3311233-511-2221111222122222211111111111111111111111111111111111111111111111111111111111-14212322222211334-24132322322223222442223A212242222322422221121231222211-2222-223211232224X3232275751542463344 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 98.4 SQ:SECSTR ####cHHHHHHHHHHHHHHHHHHHHGGGccTTccHHHHHHHHHHHHHHTccEEccTTGGGcccccEEEETTEEEcccccTccccTTcEEEEEEEEEETTEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHTTcEEcccccEEEccccccEEEEEcccccTTccccccTTcEEEEccEEEcccccEEEcTTcccEEETTcccEEEccEEEEEcccEEEETTccTTTccEEHHc DISOP:02AL 256-257| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccEEEccHHHccccccccccEEEcccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEccccEEEEcccccccccccEEcccccEEEEcccccEEEEEEEEEEcccccEEcccccccccccccc //