[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : mhpC
DDBJ      :mhpC         hydrolase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  189/915 : Eukaryota  32/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:258 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->256 3e0xB PDBj 4e-14 27.7 %
:RPS:PDB   1->257 3e3aB PDBj 3e-32 17.5 %
:RPS:SCOP  4->258 1mt3A  c.69.1.7 * 6e-34 25.1 %
:HMM:SCOP  1->258 1a88A_ c.69.1.12 * 2.3e-50 30.4 %
:RPS:PFM   23->67 PF12146 * Hydrolase_4 3e-04 40.0 %
:RPS:PFM   53->239 PF00561 * Abhydrolase_1 1e-14 32.0 %
:HMM:PFM   51->251 PF00561 * Abhydrolase_1 8.3e-24 26.9 197/231  
:HMM:PFM   22->67 PF12146 * Hydrolase_4 3.9e-09 37.0 46/79  
:BLT:SWISS 9->256 MHPC_BURP8 5e-16 27.7 %
:PROS 91->100|PS00120|LIPASE_SER

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21069.1 GT:GENE mhpC GT:PRODUCT hydrolase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(249763..250539) GB:FROM 249763 GB:TO 250539 GB:DIRECTION - GB:GENE mhpC GB:PRODUCT hydrolase GB:NOTE alpha/beta hydrolase fold family GB:PROTEIN_ID AAZ21069.1 GB:DB_XREF GI:71062066 GB:GENE:GENE mhpC LENGTH 258 SQ:AASEQ MIFQVDNKKVFASDSGQGIDKKKSTIVLLHGSGLSHIVWSLTEQYLSNQNYNVLAIDLPGHGNSEGDCLKSIEEISDWLEKVFKKLNVSELTIIGHSQGCLEALEYSLRYSKRVKNLIFIGGSYRMPVNQDLIDLAENGDDKAVQLMMKWSYENYKKFIGGNPVEKIINSPRNIREVLAIDLIACNNYKNGSEALKSIKCPTLFIFGELDKMVNIEKGKKFAELVLNSKTHIIKNCGHMIMFEKAFEMREKISEFLKK GT:EXON 1|1-258:0| BL:SWS:NREP 1 BL:SWS:REP 9->256|MHPC_BURP8|5e-16|27.7|242/288| PROS 91->100|PS00120|LIPASE_SER|PDOC00110| BL:PDB:NREP 1 BL:PDB:REP 18->256|3e0xB|4e-14|27.7|224/239| RP:PDB:NREP 1 RP:PDB:REP 1->257|3e3aB|3e-32|17.5|252/275| RP:PFM:NREP 2 RP:PFM:REP 23->67|PF12146|3e-04|40.0|45/79|Hydrolase_4| RP:PFM:REP 53->239|PF00561|1e-14|32.0|178/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 51->251|PF00561|8.3e-24|26.9|197/231|Abhydrolase_1| HM:PFM:REP 22->67|PF12146|3.9e-09|37.0|46/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 4->258|1mt3A|6e-34|25.1|251/293|c.69.1.7| HM:SCP:REP 1->258|1a88A_|2.3e-50|30.4|253/0|c.69.1.12|1/1|alpha/beta-Hydrolases| OP:NHOMO 291 OP:NHOMOORG 234 OP:PATTERN --------11111111-------3-------------------------------------111---1 ---------------1111-1---1-11111-------11--------------------------------------1--------------------11111-222-1---------------211-2---1--222-------1-1--1--------------1-1-------------------------222221111112321-1----2-1---11--------12-22212111122211---11-------------------1-----------------------------------------------------21-----1-1-111---111----------22-1--------1-----------------1112---11111-------------------------------11----1-------------11111111-11--1-1-----------------------------3---1-----------------111311--1-1111111--1111-111121111--1----------------11--211-----------12-----------1---1-1----------------------------1--1------------------------------------1-------------------------------------11----------------------------------------------------1-1--1-1---------------1221211---1-----1-2121113-1-1---------------------------------------------111------------------------111----1--------1-1------ ---------------------------------------------------------------------------------------------------1----------2221111----11111-2-231-111-1--1-11---------11-1-------1-------31--------------31--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 258 STR:RPRED 100.0 SQ:SECSTR ccTTccccEEEEEEEccccccccEEEEEEccTTccGGGGTTTHHHHHHTTEEEEEEccTTcGGGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHTTHHHHHHHHHHccHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTcccccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHHHT DISOP:02AL 258-259| PSIPRED cEEEEccEEEEEEEEcccccccccEEEEEccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHcccHHcEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHcccccEEEEEEcccccccHHHHHHHHHHccccEEEEEccccccHHHHcHHHHHHHHHHHHHc //