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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : msmX
DDBJ      :msmX         ABC sugar transporter
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
b.40.6c.37.1
:357 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   23->343 1g291 PDBj 1e-55 39.7 %
:RPS:PDB   1->242 3dmdC PDBj 7e-41 10.8 %
:RPS:SCOP  2->242 1b0uA  c.37.1.12 * 1e-41 24.8 %
:RPS:SCOP  282->351 1oxsC1  b.40.6.3 * 1e-08 18.6 %
:HMM:SCOP  1->240 1g2912 c.37.1.12 * 1.7e-56 35.9 %
:HMM:SCOP  242->355 1q12A1 b.40.6.3 * 6.9e-16 23.9 %
:RPS:PFM   48->166 PF00005 * ABC_tran 8e-15 33.3 %
:HMM:PFM   48->167 PF00005 * ABC_tran 3e-13 29.2 113/118  
:HMM:PFM   281->350 PF08402 * TOBE_2 9e-07 30.9 68/75  
:HMM:PFM   34->58 PF03193 * DUF258 7.5e-05 28.0 25/161  
:BLT:SWISS 1->354 UGPC_ERWCT 2e-55 35.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21088.1 GT:GENE msmX GT:PRODUCT ABC sugar transporter GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(268433..269506) GB:FROM 268433 GB:TO 269506 GB:DIRECTION - GB:GENE msmX GB:PRODUCT ABC sugar transporter GB:NOTE ATP-binding protein, molybdenum/tungsten binding GB:PROTEIN_ID AAZ21088.1 GB:DB_XREF GI:71062085 GB:GENE:GENE msmX LENGTH 357 SQ:AASEQ MSKINLNKISHSYNPNDPNPTYALNPFSMTWEDGKRYAILGPSGCGKTTMLNIVSGLVRPSSGKILFDDKDVTDLKTESRNIAQVFQFPVIYNTMTVYDNLAFPLRCRDFSKDIVEERVNSVAETLNLKSFLNLPARKLTADQKQLISLGRGLVREDVAAVLMDEPLTVIDPDLKFKLRRNLKEINEQYKTTLVYVTHDQNEAMTFADNIIVMSEGEVVQTGTPKELFERPNTTFVGYFIGSPAMNLFKTEALSNDSVMINDTLIKTTTDLTKLKDKNIKLGIRSEYIKLAENQKDNVLAATVDKVEDLGNYKLLTAKVGNLTIKSKINREIEVPSDSVKLHIPADRCCVYEDEKLI GT:EXON 1|1-357:0| BL:SWS:NREP 1 BL:SWS:REP 1->354|UGPC_ERWCT|2e-55|35.4|347/357| SEG 260->281|indtliktttdltklkdknikl| BL:PDB:NREP 1 BL:PDB:REP 23->343|1g291|1e-55|39.7|320/372| RP:PDB:NREP 1 RP:PDB:REP 1->242|3dmdC|7e-41|10.8|223/318| RP:PFM:NREP 1 RP:PFM:REP 48->166|PF00005|8e-15|33.3|117/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 48->167|PF00005|3e-13|29.2|113/118|ABC_tran| HM:PFM:REP 281->350|PF08402|9e-07|30.9|68/75|TOBE_2| HM:PFM:REP 34->58|PF03193|7.5e-05|28.0|25/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 2->242|1b0uA|1e-41|24.8|234/258|c.37.1.12| RP:SCP:REP 282->351|1oxsC1|1e-08|18.6|70/110|b.40.6.3| HM:SCP:REP 1->240|1g2912|1.7e-56|35.9|231/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 242->355|1q12A1|6.9e-16|23.9|113/0|b.40.6.3|1/1|MOP-like| OP:NHOMO 42682 OP:NHOMOORG 1172 OP:PATTERN SSJ8MGHHUTUQUPaNiFSPMONauMQdfQZRHABCDCHGHFCSWNWbJP*qc7QaQQWMOLKEW16A PUfF*UUZeegNWLTNKLK-KZ88S*LLLLLKjgehg***LsPudqhWgUSMpkkHMV9Afgkaugp***ZXQPPnYWUKtfdA7BACSROG5ICHH--CFRIJIeJZMN58888889BB7777FQNHPTNKQNVNflmtzHGGyUolpsgfhXcUVHEKEHCbfTf***ZHNEGIIIKHGDHZRTLKvj9Mbt*******************xz***bkp**flsstpos**WddddebbccdddcbXZWYWxdXa*zZNcYhonRS**aVQYledecnmporpxrusptrslmswnqsYXYXWYYZaZYXXuljZYanmogo***********l*lu***dggd*kfxq*bqSI**thWaflTajclmNbYMNWRRRKGJHGHWO***UNq****xy*v**v*wux*-fk*cW*c***O9**************IGHz*******z*JIJJJJJJhMQCQbNp666566665567558A6576567787786LB9B9B***y*******tuuwq*****x*xdw******xALrrksakei*w****VhbJSIMdNFGGGHGFPNLUdeZs*MfTocSboTSkIZXVRSWeUWRTRTmnW*GHJNEIGHJED8AABAAAAACLEGKHGhgqLlRaGSLuLRSURJSYPNNPNSWSRST5-DHRJI221333*s**T*prwwwszv*qr-vrqswswttswztnpqpos*****ikdkmikjmkllkhklkkh*likppppK4************33IECDBCDNOMNMG*g*XYVWVTHLOIJNJOaLNQNNEQGOQiamjjll***ltymre***EEDBCEECEHakkwijijjtzuutIHKIIJIFGGECBC44GTLLGHII997A88A9*9YCBB9B-BADAGGBLKKBEIBHGAAAXfuVTk*khgCYK 1-33aYC-VL37TgMEBD79EIEOEPEDD7A7AJGF8B8AA89556HBFIIFRKBDD89A8994766613945676A26A66644736-CK5B9699789748GC83FIbfMQKaTRGEC7COJlj7tB**f3ZPrJDE6a9FZP7ICCBXC8*ETONkFW*FdLQ8*PU*fYOMC9A8*5887FkWX*Asf8DrYihE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 357-358| PSIPRED ccEEEEEEEEEEccccccccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHccEEEEEEcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHcccHHHccccHHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHcccccEEEEEEEEEcccEEEEcccEEEcccccccccccEEEEEEcccEEEEcccccccEEEEEEEEEEEcccEEEEEEEEccEEEEEEEcccccccccEEEEEEcHHHEEEEcccccc //