[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : msmX2
DDBJ      :msmX2        ABC sugar transporter
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
b.40.6c.37.1
:359 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   6->345 2it1B PDBj 4e-48 34.8 %
:RPS:PDB   6->230 3b5jA PDBj 3e-39 25.1 %
:RPS:SCOP  6->234 1b0uA  c.37.1.12 * 5e-40 28.4 %
:RPS:SCOP  207->347 1q12A1  b.40.6.3 * 3e-15 17.2 %
:HMM:SCOP  3->236 1g2912 c.37.1.12 * 2.7e-53 37.4 %
:HMM:SCOP  240->345 1oxsC1 b.40.6.3 * 1.5e-16 25.7 %
:RPS:PFM   42->159 PF00005 * ABC_tran 8e-21 45.3 %
:HMM:PFM   42->160 PF00005 * ABC_tran 9.3e-27 34.5 113/118  
:HMM:PFM   277->342 PF08402 * TOBE_2 0.00033 19.7 66/75  
:BLT:SWISS 7->335 POTA_MESFL 2e-51 37.4 %
:PROS 133->147|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21089.1 GT:GENE msmX2 GT:PRODUCT ABC sugar transporter GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(269499..270578) GB:FROM 269499 GB:TO 270578 GB:DIRECTION - GB:GENE msmX2 GB:PRODUCT ABC sugar transporter GB:NOTE ATP-binding protein, molybdenum/tungsten binding GB:PROTEIN_ID AAZ21089.1 GB:DB_XREF GI:71062086 GB:GENE:GENE msmX2 LENGTH 359 SQ:AASEQ MNLVGENISYKLTEELQLRKISFNFEKGKLYTILGRTLSGKTTLLKTIAGLLMPDSGTIKFEDKNFLEVPVWERNIAMVYQQFINYPHLNVFENIAFPLKQRRLDPQKIKDEVFKSLKLVGLEGYEKRKIQELSGGQQQRVSVARSLVKNAKILLLDEPLVNLDYKLREQLREEFKNIFINGLSEESIVIFSTTDPREAMELNGEVIVLDEGRVLQVGAAKEIFENPKNLKVAAISNDPPMNILKADINSNKIKFEDIEIDIPDHLSKIESESFNFGIRASDVELNDNGFEFEVELAEISGSETLLHLTRGNAKIITSIEEVMDFKIRDKVKINFKSNKAYAFDETGNLASSPFGGSNV GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 7->335|POTA_MESFL|2e-51|37.4|321/350| PROS 133->147|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 6->345|2it1B|4e-48|34.8|336/361| RP:PDB:NREP 1 RP:PDB:REP 6->230|3b5jA|3e-39|25.1|219/243| RP:PFM:NREP 1 RP:PFM:REP 42->159|PF00005|8e-21|45.3|117/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 42->160|PF00005|9.3e-27|34.5|113/118|ABC_tran| HM:PFM:REP 277->342|PF08402|0.00033|19.7|66/75|TOBE_2| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 6->234|1b0uA|5e-40|28.4|225/258|c.37.1.12| RP:SCP:REP 207->347|1q12A1|3e-15|17.2|116/135|b.40.6.3| HM:SCP:REP 3->236|1g2912|2.7e-53|37.4|230/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 240->345|1oxsC1|1.5e-16|25.7|101/0|b.40.6.3|1/1|MOP-like| OP:NHOMO 43222 OP:NHOMOORG 1172 OP:PATTERN QPMASJKJZYZUXUcRkGTPONNZqHKccMXPG9DEGDIGHFCRYMVeKR*wf8RdPUWLSLLGW25A PYjG*USYccfQSKOPOJJ-JU88R*JJJJJKhcddf***MrRxdqkUiaTJvrkGKTCCigfW*kr***VTRRRsYVYLpbhB9CBCQPPJ6MDGF--FFTJJIcMWJS7666666ABCCCCCGOPKLUNLSTWMdjjtxIHGwUmhnpefdZbQSFFHGJEXbVey**YJMJILKLKJIGJbQSOMriAPes*******************xy***bnu**clsvwspr**WhijgjgfhhhhhhgabXba*dSYxxXPbWhmkQRzzbXOXmjeghpptksrwvutqspqnmqvnrsZXZYXZabcbZXYyjjdcemknln*z*********g*hs***dnmj*qi*y*gnQI**ojYcgmSakbnmQbZPOZONNJILIJHaR***VQm****************-ci*bW*b***QB**************FGI**********ONOOOOOOjQUHMeNz774777775567AABC7BBA88AAB8797MAAACC***z*******wvuvp********f********AQvtpwhpgn*m****UhgJRJOgTGJIHGHHNOKWehes*MfUqdTfqaYjMdYZRTWdWZTUSakuX*LMMRGLLLMHGABCCBDECDGUFEILJmjsLmVZJRKwSTVXULUXUTSSQUVTVZZ6-EGPNM321333*v**W*qqwwurxvyoq-vqorururrqwxroppoor*****bgciighijjjjjghjhhg*khhmnlnQ5************44HGDFCDEOPPONF*j*WWVZbXGQTPOTNRdOQSPQHPIPUjaqplos***ox*rwd***EEDCDEEDEJgro*pppqpy****MMKJKJJIKKCCBC58JVQPJJJKAA8AAAA9*CXCCCCE-DCGGHHDQRNCGKDHH88Aaj*VYk*llkEVO -222RJ8-TG4AINF86B47CE8H5I8AA5767CB65B69577467B88CDANF7BC4757653735313537675513444446725-7C466436773642CH84E6bXIOFPOQ9AA7AOFfe6e6**e3WKhFBB6W7CYJ7G987WA8*ERLLfAN*CdKP3sNX*SZPGA795b6967AVQU*3wb8DWOYS4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 354-359| PSIPRED cEEEEEEEEEEEccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHccEEEEEEcccccccccHHHHHccHHHHccccHHHHHHHHHHHHHHHccHHHHHccHHHccccHHHHHHHHHHHHccccEEEEEccHHHccHHHHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHccccccEEEEEEEEccEEEEccEEEEcccccccccccEEEEEEEccEEEEccccEEEEEEEEEEEccEEEEEEEEcccEEEEEEccccccccccEEEEEEcHHHEEEEccccHHHHHHHHHccc //