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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : murC
DDBJ      :murC         UDP-N-acetylmuramate--L-alanine ligase
Swiss-Prot:MURC_PELUB   RecName: Full=UDP-N-acetylmuramate--L-alanine ligase;         EC=6.3.2.8;AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase;

Homologs  Archaea  0/68 : Bacteria  869/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.5.1c.59.1c.72.2
:464 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->462 1gqyB PDBj 2e-71 33.6 %
:RPS:PDB   21->451 2am1A PDBj 8e-45 14.0 %
:RPS:SCOP  11->94 1j6uA1  c.5.1.1 * 7e-25 36.9 %
:RPS:SCOP  109->316 1j6uA3  c.72.2.1 * 9e-28 22.4 %
:RPS:SCOP  317->464 1gqqA2  c.59.1.1 * 2e-24 31.8 %
:HMM:SCOP  8->96 1j6uA1 c.5.1.1 * 1.2e-22 40.4 %
:HMM:SCOP  93->316 1j6uA3 c.72.2.1 * 1e-63 40.3 %
:HMM:SCOP  317->464 1p3dA2 c.59.1.1 * 3.2e-36 35.1 %
:RPS:PFM   11->106 PF01225 * Mur_ligase 7e-05 38.9 %
:RPS:PFM   113->291 PF08245 * Mur_ligase_M 2e-05 25.7 %
:RPS:PFM   321->395 PF02875 * Mur_ligase_C 1e-04 33.8 %
:HMM:PFM   113->298 PF08245 * Mur_ligase_M 6.7e-30 28.2 177/188  
:HMM:PFM   318->400 PF02875 * Mur_ligase_C 8.6e-19 24.1 83/91  
:HMM:PFM   11->105 PF01225 * Mur_ligase 1.2e-18 41.4 70/76  
:BLT:SWISS 1->464 MURC_PELUB 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20848.1 GT:GENE murC GT:PRODUCT UDP-N-acetylmuramate--L-alanine ligase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(25035..26429) GB:FROM 25035 GB:TO 26429 GB:DIRECTION - GB:GENE murC GB:PRODUCT UDP-N-acetylmuramate--L-alanine ligase GB:PROTEIN_ID AAZ20848.1 GB:DB_XREF GI:71061845 GB:GENE:GENE murC LENGTH 464 SQ:AASEQ MKIELAKTEIIHFVGIGGIGMSGLALIMKRMGFNVQGSDVLGNKNIERLKKDKIKITISHTKKNIAKATIVVISSAIKNNNPELIEAKLKQLPIYKRGEMLANIVSLTKNIVVTGSHGKTTTTSLLASIFSKTKLDPTIINGGVLNAIKNSAKLGKSDWCILEADESDGSFIHVPPTYSIVTNIDREHMDFYNSMKDLKELFIKFINKVPSFGKSFICIDDKNNKDLLSKLKMKNYYTYGTDNKSNFYIKNIKQEKEYSQYDLAINLPGKKNLTIRKIKLPLLGIHNIRNSTAAIAVAVTIGISQNIIKKGLKEFKGVQRRFNKIFTHRETNFYDDYAHHPTEIREVLNGVRAAYKNEEVICIFQPHRISRLKDLKKEFSLSFKKADVVILCPIYTAGEKIKLGFKYNNFAKDIVKNSKVRLFMVEDQYQLAKFIKNTIFGKKIVVGMGAGTISAWMRQLPELI GT:EXON 1|1-464:0| SW:ID MURC_PELUB SW:DE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8;AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; SW:GN Name=murC; OrderedLocusNames=SAR11_0023; SW:KW ATP-binding; Cell cycle; Cell division; Cell shape;Cell wall biogenesis/degradation; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Peptidoglycan synthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->464|MURC_PELUB|0.0|100.0|464/464| GO:SWS:NREP 9 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0007049|"GO:cell cycle"|Cell cycle| GO:SWS GO:0051301|"GO:cell division"|Cell division| GO:SWS GO:0008360|"GO:regulation of cell shape"|Cell shape| GO:SWS GO:0007047|"GO:cellular cell wall organization"|Cell wall biogenesis/degradation| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009252|"GO:peptidoglycan biosynthetic process"|Peptidoglycan synthesis| SEG 220->235|ddknnkdllsklkmkn| SEG 292->301|taaiavavti| BL:PDB:NREP 1 BL:PDB:REP 4->462|1gqyB|2e-71|33.6|453/469| RP:PDB:NREP 1 RP:PDB:REP 21->451|2am1A|8e-45|14.0|408/442| RP:PFM:NREP 3 RP:PFM:REP 11->106|PF01225|7e-05|38.9|72/76|Mur_ligase| RP:PFM:REP 113->291|PF08245|2e-05|25.7|171/187|Mur_ligase_M| RP:PFM:REP 321->395|PF02875|1e-04|33.8|74/84|Mur_ligase_C| HM:PFM:NREP 3 HM:PFM:REP 113->298|PF08245|6.7e-30|28.2|177/188|Mur_ligase_M| HM:PFM:REP 318->400|PF02875|8.6e-19|24.1|83/91|Mur_ligase_C| HM:PFM:REP 11->105|PF01225|1.2e-18|41.4|70/76|Mur_ligase| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF01225|IPR000713| GO:PFM GO:0009058|"GO:biosynthetic process"|PF01225|IPR000713| GO:PFM GO:0005524|"GO:ATP binding"|PF08245|IPR013221| GO:PFM GO:0009058|"GO:biosynthetic process"|PF08245|IPR013221| GO:PFM GO:0005524|"GO:ATP binding"|PF02875|IPR004101| GO:PFM GO:0009058|"GO:biosynthetic process"|PF02875|IPR004101| GO:PFM GO:0016874|"GO:ligase activity"|PF02875|IPR004101| RP:SCP:NREP 3 RP:SCP:REP 11->94|1j6uA1|7e-25|36.9|84/89|c.5.1.1| RP:SCP:REP 109->316|1j6uA3|9e-28|22.4|192/207|c.72.2.1| RP:SCP:REP 317->464|1gqqA2|2e-24|31.8|148/154|c.59.1.1| HM:SCP:REP 8->96|1j6uA1|1.2e-22|40.4|89/0|c.5.1.1|1/1|MurCD N-terminal domain| HM:SCP:REP 93->316|1j6uA3|1e-63|40.3|206/0|c.72.2.1|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 317->464|1p3dA2|3.2e-36|35.1|148/0|c.59.1.1|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 1241 OP:NHOMOORG 879 OP:PATTERN -------------------------------------------------------------------- 2211111111111111111-11111111111111111111111211111111111111111111111111111111111111111111111211111--212322222221111111111111112222222222211111---111111111111111111111111111111111111111111111111111111111111111111111211121111111111111112222222222222222222111111111111111111111111111111111111111111111111111111111111111111111111112122211111111211111111111111111111111111111112112-111111111111111111111111111111111-111111111111111111111111111211111211111111111111111121121--------111111111111111111112211122222222222222222222222222222222222222222222222212222222222232222222222232221111111111111111111222222121111111111111111111111111222222222222222222222222222222221-12222-1-11122222222222222222-22222222222222222222222222222212222222222122222222221222222222222111211111222222221222222222222222222222222222222222222222222222222122222222222222222222222222222222211212222221112111111--------------------------1111111111222 -----------------------1-11----------------------------------------------------------------------------------------------------------------------------------------1---------1----1------1--1--2--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 460 STR:RPRED 99.1 SQ:SECSTR ###ccTTccEEEEEccccHHHHHHHHHHTcccccTTccccccccEEccGGGcccccGGGGHHHHHHHTccEEEEccccccccEEEcccHHHcEHHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHTTTccEEEccTTccTTHHHHHHHTcTTccEEEEEccccTTHHHHHcccEEEEccccccccTTcccHHHHHHHHGGGTcccTcTTcEEEEEccGGGGGGcccccEEEEEEEcTTccTcccEEEEEEccccEEEEETTcccETTccEEEEEEEccccHHHHHHHHHHHHHHHTTTccHHHHHHHGGGcccccccccEEccTTTcEEEEEcccccHHHHHHHHHHTTccccEEEEEEEcccccTTHHHHHHHGGccTTTccEEEEEEcTTHHHHHHHTccHHHHccTTcEEEEEccccccTHHHHHHHHHHHccTTEEEEEEcccccTTTcccHHHT# DISOP:02AL 1-5| PSIPRED cccccccccEEEEEEEccccHHHHHHHHHHcccEEEEEEccccHHHHHHHHcccEEEEcccHHHcccccEEEEccccccccHHHHHHHHccccEEEHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHccccEEEEEEcccccccEEEEEEEEEEEEcccHHHHHHcccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHcccccEEEEEEcccccEEEEEEEEcccEEEEEEEEEEcccccccccEEEEccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHcccccEEEEccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHc //