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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : mutY
DDBJ      :mutY         A/G-specific adenine glycosylase
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  820/915 : Eukaryota  121/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->272 1rrqA PDBj 4e-41 33.7 %
:RPS:PDB   1->216 2abkA PDBj 2e-42 22.6 %
:RPS:SCOP  8->215 1ornA  a.96.1.1 * 3e-44 23.9 %
:HMM:SCOP  1->226 1munA_ a.96.1.2 * 4.7e-57 32.9 %
:RPS:PFM   38->151 PF00730 * HhH-GPD 1e-14 39.5 %
:HMM:PFM   38->163 PF00730 * HhH-GPD 6.2e-19 26.3 95/121  
:HMM:PFM   193->209 PF10576 * EndIII_4Fe-2S 0.00041 41.2 17/17  
:BLT:SWISS 10->214 YFHQ_BACSU 1e-43 40.3 %
:PROS 193->209|PS00764|ENDONUCLEASE_III_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20935.1 GT:GENE mutY GT:PRODUCT A/G-specific adenine glycosylase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(122434..123414) GB:FROM 122434 GB:TO 123414 GB:DIRECTION - GB:GENE mutY GB:PRODUCT A/G-specific adenine glycosylase GB:PROTEIN_ID AAZ20935.1 GB:DB_XREF GI:71061932 GB:GENE:GENE mutY LENGTH 326 SQ:AASEQ MTKSILTKKILYWYDNNKRSLPWRKELSQVKREYYTLVSEFMLQQTQVATVIPYFNNFIKDIPDIKSLSKIKEHKLLKYWEGLGYYSRVKNLKKTAQILEKNFNRRLPNTIDELKLLPGIGDYTSNAIMAIAFNKPFIPLDGNIERVIKRLLNLKLPKEITKDNLVKSKKILGNSTRASDYAQALMELGALICRPKNPLCYQCPLIKNCKSFKKKDFETIKERKKKIDKFYLLEVYKKNNKFLLIKNTKFNFLKNLQIFPMKQISKPDNLAKALNFKISNMNMNVIIKFSKLKGTISNSSWIDSSKLEDYTLPTFTKKIFNYLKKN GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 10->214|YFHQ_BACSU|1e-43|40.3|201/369| PROS 193->209|PS00764|ENDONUCLEASE_III_1|PDOC00615| BL:PDB:NREP 1 BL:PDB:REP 8->272|1rrqA|4e-41|33.7|261/344| RP:PDB:NREP 1 RP:PDB:REP 1->216|2abkA|2e-42|22.6|208/211| RP:PFM:NREP 1 RP:PFM:REP 38->151|PF00730|1e-14|39.5|114/144|HhH-GPD| HM:PFM:NREP 2 HM:PFM:REP 38->163|PF00730|6.2e-19|26.3|95/121|HhH-GPD| HM:PFM:REP 193->209|PF10576|0.00041|41.2|17/17|EndIII_4Fe-2S| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 1 RP:SCP:REP 8->215|1ornA|3e-44|23.9|197/214|a.96.1.1| HM:SCP:REP 1->226|1munA_|4.7e-57|32.9|222/225|a.96.1.2|1/1|DNA-glycosylase| OP:NHOMO 1326 OP:NHOMOORG 991 OP:PATTERN 11--1---1-11111-1-1---11111211111121111-11112212-2-12-111111111---11 2122211111112111-22-22112222222222222222111111111111111111--1111-2-121112222222111-22411222222221--111111222221111111111111112222222222222211---11122111112111111111-1211---112---1-21-1112211-22222222222222222222222222222222222222222222222222222222222222211-11--11111111121-11-222222222222222222222222222222222222222222211121222111111-1111-1111--11111121-1-1111-1111-11111--1-1111111111111111111111111111111111-221221111122222222222212111111111111111111111111111-111111-------11--11--1111111----111111111111111111111111111111111111112221111122222221111113111111111111221112232221111-1111---11112111111112-1---222222212222222-113111111111111111111111111111111111--1111122111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111112222221112111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111-111111111111-1111111-------------------------1111111111111 22-1211-421-111--11-----------------------------11111111-11111------------------------22-212-1111111--2212-1213111112111211131-61GB5-31311-121111--11-11-112111331-111-----1122111171111121-11111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 270 STR:RPRED 82.8 SQ:SECSTR ccHHHHHHHHHHHHHHcccccccccc##GcccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccGGGTTTHHHHHHHHHHHTcccccccGGGcTTGGGcccTTcccTTTccccccEEEEEEEEEEEEcccEEEEEEcccccTTTTcEEccEEEcTTTccHHH###################################################### DISOP:02AL 1-4, 216-224| PSIPRED ccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccEEEEEEEEEEEccEEEEEEEccccccccccccccccccccccHHHHHHHHHccccEEEEEEHHHHcccccccEEccHHHHHHccccHHHHHHHHHHHcc //